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  1. No Access

    Article

    RCCD1 promotes breast carcinogenesis through regulating hypoxia-associated mitochondrial homeostasis

    Regulator of chromosome condensation domain-containing protein 1 (RCCD1), previously reported as a partner of histone H3K36 demethylase KDM8 involved in chromosome segregation, has been identified as a potenti...

    Yani Peng, ** Liu, **nhua Liu, **ao Cheng, Lu **a, Leyi Qin, Sudun Guan in Oncogene (2023)

  2. Article

    Open Access

    Global genetic diversity, introgression, and evolutionary adaptation of indicine cattle revealed by whole genome sequencing

    Indicine cattle, also referred to as zebu (Bos taurus indicus), play a central role in pastoral communities across a wide range of agro-ecosystems, from extremely hot semiarid regions to hot humid tropical region...

    Ningbo Chen, **aoting **a, Quratulain Hanif, Fengwei Zhang in Nature Communications (2023)

  3. Article

    Open Access

    Rapid Mycobacterium abscessus antimicrobial susceptibility testing based on antibiotic treatment response map** via Raman Microspectroscopy

    Antimicrobial susceptibility tests (ASTs) are pivotal tools for detecting and combating infections caused by multidrug-resistant rapidly growing mycobacteria (RGM) but are time-consuming and labor-intensive.

    Weicong Ren, Yuli Mao, Shanshan Li, Bo Gao in Annals of Clinical Microbiology and Antimi… (2023)

  4. Article

    Open Access

    NFIB facilitates replication licensing by acting as a genome organizer

    The chromatin-based rule governing the selection and activation of replication origins in metazoans remains to be investigated. Here we report that NFIB, a member of Nuclear Factor I (NFI) family that was init...

    Wenting Zhang, Yue Wang, Yongjie Liu, Cuifang Liu, Yizhou Wang in Nature Communications (2023)

  5. No Access

    Article

    Genome-wide association study reveals that the IBSP locus affects ear size in cattle

    Ear size is a classical model for hot climate adaptation following the evolution, but the genetic basis of the traits associated with ear size remains to be elucidated. Here, we performed a genome-wide associa...

    Jiafei Shen, **aoting **a, Luyang Sun, **aohui Ma, Bizhi Huang in Heredity (2023)

  6. Article

    Open Access

    Rootstock–scion interaction affects Malus transcriptome profiles in response to cadmium

    Apple production is threatened by cadmium contamination in orchards. Cd accumulation and tolerance in grafted Malus plants is affected by rootstock, scion, and their interaction. This dataset is part of an experi...

    Yi** Huang, Luyang Sun, Jiale Wang, Yahui Chen, Jiali He, Deguo Lyu in Scientific Data (2023)

  7. No Access

    Article

    Mild and metal-free Birch-type hydrogenation of (hetero)arenes with boron carbonitride in water

    The direct reduction of inert planar arenes and heteroarenes with visible light remains rarely explored, as the energy of one visible-light photon is unable to overcome the stabilization of aromatics. Here we ...

    Tao Yuan, Luyang Sun, Ziwei Wu, Rong Wang, Xu Cai, Wei Lin in Nature Catalysis (2022)

  8. Article

    Open Access

    The existence of a nonclassical TCA cycle in the nucleus that wires the metabolic-epigenetic circuitry

    The scope and variety of the metabolic intermediates from the mitochondrial tricarboxylic acid (TCA) cycle that are engaged in epigenetic regulation of the chromatin function in the nucleus raise an outstandin...

    Xujun Liu, Wenzhe Si, Lin He, Jianguo Yang in Signal Transduction and Targeted Therapy (2021)

  9. No Access

    Article

    Altered chromatin states drive cryptic transcription in aging mammalian stem cells

    A repressive chromatin state featuring trimethylated lysine 36 on histone H3 (H3K36me3) and DNA methylation suppresses cryptic transcription in embryonic stem cells. Cryptic transcription is elevated with age ...

    Brenna S. McCauley, Luyang Sun, Ruofan Yu, Minjung Lee, Haiying Liu in Nature Aging (2021)

  10. No Access

    Article

    The IRENA lncRNA converts chemotherapy-polarized tumor-suppressing macrophages to tumor-promoting phenotypes in breast cancer

    Although chemotherapy can stimulate antitumor immunity by inducing interferon (IFN) response, the functional role of tumor-associated macrophages in this scenario remains unclear. Here, we found that IFN-activ...

    Jiang Liu, Liyan Lao, Jianing Chen, Jiang Li, Wenfeng Zeng, **aofeng Zhu in Nature Cancer (2021)

  11. Article

    Open Access

    Inactivating histone deacetylase HDA promotes longevity by mobilizing trehalose metabolism

    Histone acetylations are important epigenetic markers for transcriptional activation in response to metabolic changes and various stresses. Using the high-throughput SEquencing-Based Yeast replicative Lifespan...

    Ruofan Yu, **aohua Cao, Luyang Sun, Jun-yi Zhu, Brian M Wasko in Nature Communications (2021)

  12. No Access

    Article

    Tracking break-induced replication shows that it stalls at roadblocks

    Break-induced replication (BIR) repairs one-ended double-strand breaks in DNA similar to those formed by replication collapse or telomere erosion, and it has been implicated in the initiation of genome instabi...

    Li** Liu, Zhenxin Yan, Beth A. Osia, Jerzy Twarowski, Luyang Sun, Juraj Kramara in Nature (2021)

  13. Article

    Open Access

    Broadband bifunctional Luneburg–Fisheye lens based on anisotropic metasurface

    Luneburg lenses and Maxwell fisheye lenses possess distinct properties of focusing, well beyond conventional lenses made of uniform materials. In this paper, a planar broadband bifunctional Luneburg-fisheye le...

    Jiaqing Chen, Yongjiu Zhao, Lei **ng, Zheng He, Luyang Sun in Scientific Reports (2020)

  14. Article

    Open Access

    SIRT7 slows down stem cell aging by preserving heterochromatin: a perspective on the new discovery

    Luyang Sun, Weiwei Dang in Protein & Cell (2020)

  15. No Access

    Article

    Imbalance of the reciprocally inhibitory loop between the ubiquitin-specific protease USP43 and EGFR/PI3K/AKT drives breast carcinogenesis

    Hyperactivation of EGFR/PI3K/AKT is a prominent feature of various human cancers. Thus, understanding how this molecular cascade is balanced is of great importance. We report here that the ubiquitin-specific p...

    Lin He, **nhua Liu, Jianguo Yang, Wan** Li, Shumeng Liu, Xujun Liu in Cell Research (2018)

  16. Article

    Open Access

    JMJD6 promotes melanoma carcinogenesis through regulation of the alternative splicing of PAK1, a key MAPK signaling component

    Melanoma, originated from melanocytes located on the basal membrane of the epithelial tissue, is the most aggressive form of skin cancer that accounts for 75% of skin cancer-related death. Although it is belie...

    Xujun Liu, Wenzhe Si, **nhua Liu, Lin He, Jie Ren, Ziran Yang in Molecular Cancer (2017)

  17. Article

    Open Access

    ZNF516 suppresses EGFR by targeting the CtBP/LSD1/CoREST complex to chromatin

    EGFR is required for animal development, and dysregulation of EGFR is critically implicated in malignant transformation. However, the molecular mechanism underlying the regulation of EGFR expression remains po...

    Lifang Li, **nhua Liu, Lin He, Jianguo Yang, Fei Pei, Wan** Li in Nature Communications (2017)

  18. No Access

    Article

    GWAS analysis of QTL for enteric septicemia of catfish and their involved genes suggest evolutionary conservation of a molecular mechanism of disease resistance

    Disease problems cause major economic losses for the aquaculture industries. In catfish, enteric septicemia of catfish (ESC), caused by the bacterial pathogen Edwardsiella ictaluri, is the leading disease problem...

    Tao Zhou, Shikai Liu, **n Geng, Yulin **, Chen Jiang in Molecular Genetics and Genomics (2017)

  19. No Access

    Article

    Nucleation of DNA repair factors by FOXA1 links DNA demethylation to transcriptional pioneering

    Yongfeng Shang and colleagues report that the pioneering factor FOXA1 associates with DNA repair complexes and regulates DNA demethylation at its genomic targets in a DNA polymerase β–dependent manner. They sh...

    Yu Zhang, Di Zhang, Qian Li, **g Liang, Luyang Sun, **a Yi, Zhe Chen in Nature Genetics (2016)

  20. Article

    Open Access

    SIRT7 is a histone desuccinylase that functionally links to chromatin compaction and genome stability

    Although SIRT7 is a member of sirtuin family proteins that are described as NAD+-dependent class III histone deacetylases, the intrinsic enzymatic activity of this sirtuin protein remains to be investigated and t...

    Lei Li, Lan Shi, Shangda Yang, Ruorong Yan, Di Zhang, Jianguo Yang in Nature Communications (2016)

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