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The tissue proteome in the multi-omic landscape of kidney disease

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  1. Article

    Open Access

    Octyl itaconate enhances VSVΔ51 oncolytic virotherapy by multitarget inhibition of antiviral and inflammatory pathways

    The presence of heterogeneity in responses to oncolytic virotherapy poses a barrier to clinical effectiveness, as resistance to this treatment can occur through the inhibition of viral spread within the tumor,...

    Naziia Kurmasheva, Aida Said, Boaz Wong, Priscilla Kinderman in Nature Communications (2024)

  2. Article

    Open Access

    The proteasome modulates endocytosis specifically in glomerular cells to promote kidney filtration

    Kidney filtration is ensured by the interaction of podocytes, endothelial and mesangial cells. Immunoglobulin accumulation at the filtration barrier is pathognomonic for glomerular injury. The mechanisms that ...

    Wiebke Sachs, Lukas Blume, Desiree Loreth, Lisa Schebsdat in Nature Communications (2024)

  3. Article

    Open Access

    In vivo characterization of a podocyte-expressed short podocin isoform

    The most common genetic causes of steroid-resistant nephrotic syndrome (SRNS) are mutations in the NPHS2 gene, which encodes the cholesterol-binding, lipid-raft associated protein podocin. Mass spectrometry and c...

    Linus Butt, David Unnersjö-Jess, Dervla Reilly, Robert Hahnfeldt in BMC Nephrology (2023)

  4. Article

    Open Access

    Long-read sequencing identifies a common transposition haplotype predisposing for CLCNKB deletions

    Long-read sequencing is increasingly used to uncover structural variants in the human genome, both functionally neutral and deleterious. Structural variants occur more frequently in regions with a high homolog...

    Nikolai Tschernoster, Florian Erger, Stefan Kohl, Björn Reusch in Genome Medicine (2023)

  5. Article

    Open Access

    An integrated organoid omics map extends modeling potential of kidney disease

    Kidney organoids are a promising model to study kidney disease, but their use is constrained by limited knowledge of their functional protein expression profile. Here, we define the organoid proteome and trans...

    Moritz Lassé, Jamal El Saghir, Celine C. Berthier, Sean Eddy in Nature Communications (2023)

  6. Article

    Open Access

    Accelerated lysine metabolism conveys kidney protection in salt-sensitive hypertension

    Hypertension and kidney disease have been repeatedly associated with genomic variants and alterations of lysine metabolism. Here, we combined stable isotope labeling with untargeted metabolomics to investigate...

    Markus M. Rinschen, Oleg Palygin, Ashraf El-Meanawy in Nature Communications (2022)

  7. Article

    Open Access

    Proteolysis and inflammation of the kidney glomerulus

    Proteases play a central role in regulating renal pathophysiology and are increasingly evaluated as actionable drug targets. Here, we review the role of proteolytic systems in inflammatory kidney disease. Infl...

    Fatih Demir, Anne Troldborg, Steffen Thiel, Moritz Lassé in Cell and Tissue Research (2021)

  8. Article

    Open Access

    The ubiquitin-conjugating enzyme UBE2K determines neurogenic potential through histone H3 in human embryonic stem cells

    Histones modulate gene expression by chromatin compaction, regulating numerous processes such as differentiation. However, the mechanisms underlying histone degradation remain elusive. Human embryonic stem cel...

    Azra Fatima, Dilber Irmak, Alireza Noormohammadi in Communications Biology (2020)

  9. Article

    Open Access

    Urine-derived cells: a promising diagnostic tool in Fabry disease patients

    Fabry disease is a lysosomal storage disorder resulting from impaired alpha-galactosidase A (α-Gal A) enzyme activity due to mutations in the GLA gene. Currently, powerful diagnostic tools and in vivo research mo...

    Gisela G. Slaats, Fabian Braun, Martin Hoehne, Laura E. Frech in Scientific Reports (2018)

  10. Article

    Open Access

    Targeted deletion of the AAA-ATPase Ruvbl1 in mice disrupts ciliary integrity and causes renal disease and hydrocephalus

    Ciliopathies comprise a large number of hereditary human diseases and syndromes caused by mutations resulting in dysfunction of either primary or motile cilia. Both types of cilia share a similar architecture....

    Claudia Dafinger, Markus M. Rinschen, Lori Borgal in Experimental & Molecular Medicine (2018)

  11. Article

    Open Access

    Characterization of a short isoform of the kidney protein podocin in human kidney

    Steroid resistant nephrotic syndrome is a severe hereditary disease often caused by mutations in the NPHS2 gene. This gene encodes the lipid binding protein podocin which localizes to the slit diaphragm of podocy...

    Linus A Völker, Eva-Maria Schurek, Markus M Rinschen, Judit Tax in BMC Nephrology (2013)