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  1. No Access

    Article

    A noncoding secret to stay young—protecting Treg cells to keep the balance in the liver

    Hiep Tai Nguyen, Pedro J. Batista in Science China Life Sciences (2023)

  2. Article

    Open Access

    The autism risk factor CHD8 is a chromatin activator in human neurons and functionally dependent on the ERK-MAPK pathway effector ELK1

    The chromodomain helicase DNA-binding protein CHD8 is the most frequently mutated gene in autism spectrum disorder. Despite its prominent disease involvement, little is known about its molecular function in th...

    Bahareh Haddad Derafshi, Tamas Danko, Soham Chanda, Pedro J. Batista in Scientific Reports (2022)

  3. No Access

    Article

    RNA: a double-edged sword in genome maintenance

    All organisms must safeguard the integrity of their DNA to avoid deleterious consequences of genome instability, which have been linked to human diseases such as autoimmune disorders, neurodegenerative disease...

    Dali Zong, Philipp Oberdoerffer, Pedro J. Batista in Nature Reviews Genetics (2020)

  4. No Access

    Article

    RNA post-transcriptional modification speaks to chromatin

    The role of N6-methyladenosine (m6A) is still not fully understood. Two new studies advance understanding of this RNA modification. One shows that m6A modification of nascent messenger RNA promotes transcription ...

    Dalen Chan, Pedro J. Batista in Nature Genetics (2020)

  5. Article

    Open Access

    PIRCh-seq: functional classification of non-coding RNAs associated with distinct histone modifications

    We develop PIRCh-seq, a method which enables a comprehensive survey of chromatin-associated RNAs in a histone modification-specific manner. We identify hundreds of chromatin-associated RNAs in several cell typ...

    **gwen Fang, Qing Ma, Ci Chu, Beibei Huang, Lingjie Li, Pengfei Cai in Genome Biology (2019)

  6. No Access

    Article

    An epitranscriptomic vulnerability in myeloid malignancies

    A recent study finds that the N6-methyladenosine (m6A) modifier METTL3 regulates proliferation and differentiation in myeloid cells and acute myeloid leukemia (AML).

    Alexandra C Schmiechen, Pedro J Batista in Nature Medicine (2017)

  7. No Access

    Article

    m6A mRNA methylation controls T cell homeostasis by targeting the IL-7/STAT5/SOCS pathways

    The authors assess the role of N6-methyladenosine in T cell development and function, and show that RNA methylation controls T cell homeostasis by regulating IL-7-mediated STAT5 activation.

    Hua-Bing Li, Jiyu Tong, Shu Zhu, Pedro J. Batista, Erin E. Duffy, Jun Zhao in Nature (2017)

  8. Article

    Erratum: Structural imprints in vivo decode RNA regulatory mechanisms

    Nature 519, 486–490 (2015); doi: 10.1038/nature14263 In Fig. 2a of this Letter, an error in the placement of the labels on the pie chart was introduced during the production process. The correct numbers were r...

    Robert C. Spitale, Ryan A. Flynn, Qiangfeng Cliff Zhang, Pete Crisalli, Byron Lee in Nature (2015)

  9. No Access

    Article

    Structural imprints in vivo decode RNA regulatory mechanisms

    The single-stranded nature of RNAs synthesized in the cell gives them great scope to form different structures, but current methods to measure RNA structure in vivo are limited; now, a new methodology allows rese...

    Robert C. Spitale, Ryan A. Flynn, Qiangfeng Cliff Zhang, Pete Crisalli, Byron Lee in Nature (2015)

  10. No Access

    Protocol

    Cloning Argonaute-Associated Small RNAs from Caenorhabditis elegans

    Small RNA pathways fulfill a plethora of gene-regulatory functions in a variety of organisms. In the nematode worm, Caenorhabditis elegans, a number of endogenous small RNA pathways have been described, including...

    Weifeng Gu, Julie M. Claycomb, Pedro J. Batista, Craig C. Mello in Argonaute Proteins (2011)