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  1. Article

    Open Access

    Author Correction: Distinct molecular and immune hallmarks of inflammatory arthritis induced by immune checkpoint inhibitors for cancer therapy

    Sang T. Kim, Yanshuo Chu, Mercy Misoi, Maria E. Suarez-Almazor in Nature Communications (2024)

  2. Article

    Open Access

    Enhancing NSCLC recurrence prediction with PET/CT habitat imaging, ctDNA, and integrative radiogenomics-blood insights

    While we recognize the prognostic importance of clinicopathological measures and circulating tumor DNA (ctDNA), the independent contribution of quantitative image markers to prognosis in non-small cell lung ca...

    Sheeba J. Sujit, Muhammad Aminu, Tatiana V. Karpinets in Nature Communications (2024)

  3. Article

    Open Access

    Genomic and transcriptomic analysis of checkpoint blockade response in advanced non-small cell lung cancer

    Anti-PD-1/PD-L1 agents have transformed the treatment landscape of advanced non-small cell lung cancer (NSCLC). To expand our understanding of the molecular features underlying response to checkpoint inhibitor...

    Arvind Ravi, Matthew D. Hellmann, Monica B. Arniella, Mark Holton in Nature Genetics (2023)

  4. Article

    Open Access

    Neoadjuvant chemotherapy plus nivolumab with or without ipilimumab in operable non-small cell lung cancer: the phase 2 platform NEOSTAR trial

    Neoadjuvant ipilimumab + nivolumab (Ipi+Nivo) and nivolumab + chemotherapy (Nivo+CT) induce greater pathologic response rates than CT alone in patients with operable non-small cell lung cancer (NSCLC). The imp...

    Tina Cascone, Cheuk H. Leung, Annikka Weissferdt, Apar Pataer in Nature Medicine (2023)

  5. Article

    Open Access

    Efficacy and clinicogenomic correlates of response to immune checkpoint inhibitors alone or with chemotherapy in non-small cell lung cancer

    The role of combination chemotherapy with immune checkpoint inhibitors (ICI) (ICI-chemo) over ICI monotherapy (ICI-mono) in non-small cell lung cancer (NSCLC) remains underexplored. In this retrospective study...

    Lingzhi Hong, Muhammad Aminu, Shenduo Li, Xuetao Lu in Nature Communications (2023)

  6. Article

    Open Access

    Immunogenomic intertumor heterogeneity across primary and metastatic sites in a patient with lung adenocarcinoma

    Lung cancer is the leading cause of cancer death, partially owing to its extensive heterogeneity. The analysis of intertumor heterogeneity has been limited by an inability to concurrently obtain tissue from sy...

    Runzhe Chen, Jun Li, Junya Fujimoto in Journal of Experimental & Clinical Cancer … (2022)

  7. Article

    Open Access

    Distinct molecular and immune hallmarks of inflammatory arthritis induced by immune checkpoint inhibitors for cancer therapy

    Immune checkpoint inhibitors are associated with immune-related adverse events (irAEs), including arthritis (arthritis-irAE). Management of arthritis-irAE is challenging because immunomodulatory therapy for ar...

    Sang T. Kim, Yanshuo Chu, Mercy Misoi, Maria E. Suarez-Almazor in Nature Communications (2022)

  8. Article

    Open Access

    Cold and heterogeneous T cell repertoire is associated with copy number aberrations and loss of immune genes in small-cell lung cancer

    Small-cell lung cancer (SCLC) is speculated to harbor complex genomic intratumor heterogeneity (ITH) associated with high recurrence rate and suboptimal response to immunotherapy. Here, using multi-region whol...

    Ming Chen, Runzhe Chen, Ying **, Jun Li, **n Hu, Jiexin Zhang in Nature Communications (2021)

  9. No Access

    Article

    Deep learning-based prediction of the T cell receptor–antigen binding specificity

    Neoantigens play a key role in the recognition of tumour cells by T cells; however, only a small proportion of neoantigens truly elicit T-cell responses, and few clues exist as to which neoantigens are recogni...

    Tianshi Lu, Ze Zhang, James Zhu, Yunguan Wang, Peixin Jiang in Nature Machine Intelligence (2021)

  10. Article

    Open Access

    Nodal immune flare mimics nodal disease progression following neoadjuvant immune checkpoint inhibitors in non-small cell lung cancer

    Radiographic imaging is the standard approach for evaluating the disease involvement of lymph nodes in patients with operable NSCLC although the impact of neoadjuvant immune checkpoint inhibitors (ICIs) on lym...

    Tina Cascone, Annikka Weissferdt, Myrna C. B. Godoy in Nature Communications (2021)

  11. Article

    Open Access

    Correction to: CD73 expression defines immune, molecular, and clinicopathological subgroups of lung adenocarcinoma

    The original version of this article unfortunately contained a mistake.

    Pedro Rocha, Ruth Salazar, Jiexin Zhang, Debora Ledesma in Cancer Immunology, Immunotherapy (2021)

  12. Article

    Open Access

    CD8+ T cells inhibit metastasis and CXCL4 regulates its function

    The mechanism by which immune cells regulate metastasis is unclear. Understanding the role of immune cells in metastasis will guide the development of treatments improving patient survival.

    Robiya Joseph, Rama Soundararajan, Suhas Vasaikar, Fei Yang in British Journal of Cancer (2021)

  13. Article

    Open Access

    CD73 expression defines immune, molecular, and clinicopathological subgroups of lung adenocarcinoma

    CD73 is a membrane-bound enzyme crucial in adenosine generation. The adenosinergic pathway plays a critical role in immunosuppression and in anti-tumor effects of immune checkpoint inhibitors (ICI). Here, we i...

    Pedro Rocha, Ruth Salazar, Jiexin Zhang, Debora Ledesma in Cancer Immunology, Immunotherapy (2021)

  14. Article

    Open Access

    Th17 cells contribute to combination MEK inhibitor and anti-PD-L1 therapy resistance in KRAS/p53 mutant lung cancers

    Understanding resistance mechanisms to targeted therapies and immune checkpoint blockade in mutant KRAS lung cancers is critical to develo** novel combination therapies and improving patient survival. Here, ...

    David H. Peng, B. Leticia Rodriguez, Lixia Diao in Nature Communications (2021)

  15. Article

    Open Access

    A collagen glucosyltransferase drives lung adenocarcinoma progression in mice

    Cancer cells are a major source of enzymes that modify collagen to create a stiff, fibrotic tumor stroma. High collagen lysyl hydroxylase 2 (LH2) expression promotes metastasis and is correlated with shorter s...

    Hou-Fu Guo, Neus Bota-Rabassedas, Masahiko Terajima in Communications Biology (2021)

  16. No Access

    Article

    Neoadjuvant nivolumab or nivolumab plus ipilimumab in operable non-small cell lung cancer: the phase 2 randomized NEOSTAR trial

    Ipilimumab improves clinical outcomes when combined with nivolumab in metastatic non-small cell lung cancer (NSCLC), but its efficacy and impact on the immune microenvironment in operable NSCLC remain unclear....

    Tina Cascone, William N. William Jr, Annikka Weissferdt, Cheuk H. Leung in Nature Medicine (2021)

  17. Article

    Open Access

    Development, characterization, and applications of multi-material stereolithography bioprinting

    As a 3D bioprinting technique, hydrogel stereolithography has historically been limited in its ability to capture the spatial heterogeneity that permeates mammalian tissues and dictates structure–function rela...

    Bagrat Grigoryan, Daniel W. Sazer, Amanda Avila, Jacob L. Albritton in Scientific Reports (2021)

  18. Article

    Open Access

    A Phase 1 study of gefitinib combined with durvalumab in EGFR TKI-naive patients with EGFR mutation-positive locally advanced/metastatic non-small-cell lung cancer

    EGFR tyrosine kinase inhibitors (TKIs) induce cytolysis and release of tumour proteins, which can stimulate antigen-specific T cells. The safety and efficacy of durvalumab and gefitinib in combination for TKI-...

    Benjamin C. Creelan, Tammie C. Yeh, Sang-We Kim in British Journal of Cancer (2021)

  19. Article

    Open Access

    Multiomics profiling of primary lung cancers and distant metastases reveals immunosuppression as a common characteristic of tumor cells with metastatic plasticity

    Metastasis is the primary cause of cancer mortality accounting for 90% of cancer deaths. Our understanding of the molecular mechanisms driving metastasis is rudimentary.

    Won-Chul Lee, Alexandre Reuben, **n Hu, Nicholas McGranahan, Runzhe Chen in Genome Biology (2020)

  20. No Access

    Article

    MBIP (MAP3K12 binding inhibitory protein) drives NSCLC metastasis by JNK-dependent activation of MMPs

    Metastasis is the cause for 90% of cancer-related mortalities. Identification of genetic drivers promoting dissemination of tumor cells may provide opportunities for novel therapeutic strategies. We previously...

    Joshua Kapere Ochieng, Samrat T. Kundu, Rakhee Bajaj, B. Leticia Rodriguez in Oncogene (2020)

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