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Multiple-probe-assisted DNA capture and amplification for high-throughput African swine fever virus detection
AbstractAfrican swine fever (ASF) is one of the most devastating infectious diseases affecting domestic pigs and wild boar. The grave socio-economic...
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Integrating genomic sequencing resources: an innovative perspective on recycling with universal Angiosperms353 probe sets
Sequencing strategies have continually advanced, with high-throughput sequencing (HTS) technologies emerging as pivotal tools in plant phylogenomics....
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Telomere-specific chromatin capture using a pyrrole–imidazole polyamide probe for the identification of proteins and non-coding RNAs
BackgroundKnowing chromatin components at a DNA regulatory element at any given time is essential for understanding how the element works during...
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Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture
Chromosome conformation capture (3C) methods measure the spatial proximity between DNA elements in the cell nucleus. Many methods have been developed...
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Determining chromatin architecture with Micro Capture-C
Micro Capture-C (MCC) is a chromatin conformation capture (3C) method for visualizing reproducible three-dimensional contacts of specified regions of...
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Functionalized tetrahedral DNA frameworks for the capture of circulating tumor cells
Identification and characterization of circulating tumor cells (CTCs) from blood samples of patients with cancer can help monitor parameters such as...
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A comprehensive assessment of exome capture methods for RNA sequencing of formalin-fixed and paraffin-embedded samples
RNA-Seq analysis of Formalin-Fixed and Paraffin-Embedded (FFPE) samples has emerged as a highly effective approach and is increasingly being used in...
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ProBac-seq, a bacterial single-cell RNA sequencing methodology using droplet microfluidics and large oligonucleotide probe sets
Methods that measure the transcriptomic state of thousands of individual cells have transformed our understanding of cellular heterogeneity in...
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Revealing the Arabidopsis AtGRP7 mRNA binding proteome by specific enhanced RNA interactome capture
BackgroundThe interaction of proteins with RNA in the cell is crucial to orchestrate all steps of RNA processing. RNA interactome capture (RIC)...
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Rational probe design for efficient rRNA depletion and improved metatranscriptomic analysis of human microbiomes
The microbiota that colonize the human gut and other tissues are dynamic, varying both in composition and functional state between individuals and...
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A dicey situation: capture behaviours in free-ranging dice snakes
AbstractWhen captured by a predator, the prey’s options for escape decrease dramatically; however, some species, such as dice snakes, display a wide...
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Species-aware DNA language models capture regulatory elements and their evolution
BackgroundThe rise of large-scale multi-species genome sequencing projects promises to shed new light on how genomes encode gene regulatory...
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Targeted Chromosome Conformation Capture (HiCap)
Targeted chromosome conformation capture (HiCap) is an experimental method for detecting spatial interactions of genomic features such as promoters...
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Probe-based bacterial single-cell RNA sequencing predicts toxin regulation
Clonal bacterial populations rely on transcriptional variation across individual cells to produce specialized states that increase fitness....
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GenoBaits®WheatplusEE: a targeted capture sequencing panel for quick and accurate identification of wheat–Thinopyrum derivatives
Key messageA total of 90,000 capture probes derived from wheat and Thinopyrum elongatum were integrated into one chip, which served as an economical...
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DNA segment capture by Smc5/6 holocomplexes
Three distinct structural maintenance of chromosomes (SMC) complexes facilitate chromosome folding and segregation in eukaryotes, presumably by DNA...
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Chromosome Conformation Capture for Large Genomes
The gigantic 32Gb Axolotl genome inspires fascinating questions such as: how such a big genome is organized and packed in nuclei and how regulation...
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Targeted Sequencing in Coffee with the Daicel Arbor Biosciences Exome Capture Kit
Exome Capture is a molecular biology technique that, in combination with Next Generation DNA sequencing technologies (NGS), allows for selectively...
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Comparison of capture-based mtDNA sequencing performance between MGI and illumina sequencing platforms in various sample types
BackgroundMitochondrial genome abnormalities can lead to mitochondrial dysfunction, which in turn affects cellular biology and is closely associated...
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Characterizing chromatin interactions of regulatory elements and nucleosome positions, using Hi-C, Micro-C, and promoter capture Micro-C
BackgroundRegulatory elements such as promoters, enhancers, and insulators interact each other to mediate molecular processes. To capture chromatin...
