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    Article

    Theoretical investigations of the reaction mechanism and kinetic for the reaction between mercury and hydrogen fluoride

    To understand the detailed reaction kinetics and mechanism of the reaction between Hg and HF, theoretical investigations of their reactions at different temperatures were carried out. The results suggest that ...

    Qinwei Yu, Jianming Yang, Hai-Rong Zhang in Reaction Kinetics, Mechanisms and Catalysis (2024)

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    Article

    A Multi-view Molecular Pre-training with Generative Contrastive Learning

    Molecular representation learning can preserve meaningful molecular structures as embedding vectors, which is a necessary prerequisite for molecular property prediction. Yet, learning how to accurately represe...

    Yunwu Liu, Ruisheng Zhang, Yongna yuan in Interdisciplinary Sciences: Computational … (2024)

  3. No Access

    Article

    Investigations of the reaction mechanism of sodium with hydrogen fluoride to form sodium fluoride and the adsorption of hydrogen fluoride on sodium fluoride monomer and tetramer

    The reaction between Na and HF is a typical harpooning reaction which is of great interest due to its significance in understanding the elementary chemical reaction kinetics. This work aims to investigate the ...

    Qinwei Yu, Jianming Yang, Hai-Rong Zhang, Peng-Yu Liang in Journal of Molecular Modeling (2024)

  4. Article

    TranGRU: focusing on both the local and global information of molecules for molecular property prediction

    Molecular property prediction is an essential but challenging task in drug discovery. The recurrent neural network (RNN) and Transformer are the mainstream methods for sequence modeling, and both have been suc...

    **g Jiang, Ruisheng Zhang, Jun Ma, Yunwu Liu, Enjie Yang in Applied Intelligence (2023)

  5. No Access

    Article

    The Achievement of Multiple Nationally Determined Contribution Goals and Regional Economic Development in China

    In this paper, we develop a multiregional dynamic computable general equilibrium model, in which the technical details of the power sector are enriched by endogenizing nonfossil energy technological change. We...

    Yongna Yuan, Guiyu Li, Hongbo Duan in Environmental and Resource Economics (2023)

  6. Article

    Open Access

    An XGBoost-Based Knowledge Tracing Model

    The knowledge tracing (KT) model is an effective means to realize the personalization of online education using artificial intelligence methods. It can accurately evaluate the learning state of students and co...

    Wei Su, Fan Jiang, Chunyan Shi, Dongqing Wu in International Journal of Computational Int… (2023)

  7. No Access

    Article

    Identification of top-k influential nodes based on discrete crow search algorithm optimization for influence maximization

    Influence maximization refers to selecting a small number of influential nodes in a given network to maximize the influence affected by the subset. In social network analysis and viral marketing, influence max...

    Huan Li, Ruisheng Zhang, Zhili Zhao, **n Liu, Yongna Yuan in Applied Intelligence (2021)

  8. No Access

    Article

    A general RNA force field: comprehensive analysis of energy minima of molecular fragments of RNA

    Force fields are actively used to study RNA. Development of accurate force fields relies on a knowledge of how the variation of properties of molecules depends on their structure. Detailed scrutiny of RNA’s co...

    Yongna Yuan, Matthew J. L. Mills, Zhuangzhuang Zhang in Journal of Molecular Modeling (2021)

  9. No Access

    Article

    Halogen bonds and other noncovalent interactions in the crystal structures of trans-1,2-diiodo alkenes: an ab initio and QTAIM study

    A series of interatomic interactions interpretable as halogen bonds involving I…I, I…O, and I…C(π), as well as the noncovalent interactions I…H and O…O, were observed in the crystal structures of trans-1,2-dii...

    Yongna Yuan, Matthew J. L. Mills, Fuyang Li, Yuhong Du in Journal of Molecular Modeling (2020)

  10. No Access

    Chapter and Conference Paper

    Using Hybrid Similarity-Based Collaborative Filtering Method for Compound Activity Prediction

    It is important for researchers to predict compound activity to the targets quickly and effectively in the field of drug design. In the paper, the problem of compound activity prediction is converted to the re...

    Jun Ma, Ruisheng Zhang, Yongna Yuan in Intelligent Computing Theories and Applica… (2018)

  11. No Access

    Article

    Impacts of total energy consumption control and energy quota allocation on China’s regional economy based on a 30-region computable general equilibrium analysis

    This paper examined the impacts of the total energy consumption control policy and energy quota allocation plans on China’s regional economy. This research analyzed the influences of different energy quota all...

    Na Li, Minjun Shi, Zhiyuan Shang, Yongna Yuan in Chinese Geographical Science (2015)

  12. No Access

    Article

    Multipolar electrostatics based on the Kriging machine learning method: an application to serine

    A multipolar, polarizable electrostatic method for future use in a novel force field is described. Quantum Chemical Topology (QCT) is used to partition the electron density of a chemical system into atoms, the...

    Yongna Yuan, Matthew J L Mills, Paul LA Popelier in Journal of Molecular Modeling (2014)

  13. No Access

    Article

    Prediction of the binding affinities of adenosine A2A receptor antagonists based on the heuristic method and support vector machine

    Support vector machine (SVM) was used to develop a nonlinear quantitative structure–activity relationship (QSAR) model for the prediction of the activities of the adenosine A2A receptor antagonists. Six molecular...

    Peng Lu, **a Wei, Ruisheng Zhang, Yongna Yuan, Zhiguo Gong in Medicinal Chemistry Research (2011)

  14. No Access

    Chapter and Conference Paper

    Extracting Information of Anti-AIDS Inhibitor from the Biological Literature Based on Ontology

    Nowadays, it is still the primary problem to find the inhibitors of retrovirus, protease and integrase in anti-AIDS drug design. However, the research and experimental results about anti-AIDS inhibitors mainly...

    Chunyan Zhang, ** Du, Ruisheng Zhang, **aoliang Fan in Frontiers in Algorithmics (2007)