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  1. Article

    Open Access

    T-bet+ B cells are activated by and control endogenous retroviruses through TLR-dependent mechanisms

    Endogenous retroviruses (ERVs) are an integral part of the mammalian genome. The role of immune control of ERVs in general is poorly defined as is their function as anti-cancer immune targets or drivers of aut...

    Eileen Rauch, Timm Amendt, Aleksandra Lopez Krol, Fabian B. Lang in Nature Communications (2024)

  2. Article

    Open Access

    Quantitative three-dimensional imaging of chemical short-range order via machine learning enhanced atom probe tomography

    Chemical short-range order (CSRO) refers to atoms of specific elements self-organising within a disordered crystalline matrix to form particular atomic neighbourhoods. CSRO is typically characterized indirectl...

    Yue Li, Ye Wei, Zhangwei Wang, **aochun Liu, Timoteo Colnaghi in Nature Communications (2023)

  3. Article

    Open Access

    Bacterial vesicles block viral replication in macrophages via TLR4-TRIF-axis

    Gram-negative bacteria naturally secrete nano-sized outer membrane vesicles (OMVs), which are important mediators of communication and pathogenesis. OMV uptake by host cells activates TLR signalling via transp...

    Jeff Bierwagen, Marie Wiegand, Katrin Laakmann in Cell Communication and Signaling (2023)

  4. Article

    Open Access

    A machine learning route between band map** and band structure

    The electronic band structure and crystal structure are the two complementary identifiers of solid-state materials. Although convenient instruments and reconstruction algorithms have made large, empirical, cry...

    R. Patrick **an, Vincent Stimper, Marios Zacharias in Nature Computational Science (2023)

  5. Article

    Open Access

    Overcoming barriers to data sharing with medical image generation: a comprehensive evaluation

    Privacy concerns around sharing personally identifiable information are a major barrier to data sharing in medical research. In many cases, researchers have no interest in a particular individual’s information...

    August DuMont Schütte, Jürgen Hetzel, Sergios Gatidis, Tobias Hepp in npj Digital Medicine (2021)

  6. Article

    Open Access

    Real-time prediction of COVID-19 related mortality using electronic health records

    Coronavirus disease 2019 (COVID-19) is a respiratory disease with rapid human-to-human transmission caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Due to the exponential growth of ...

    Patrick Schwab, Arash Mehrjou, Sonali Parbhoo, Leo Anthony Celi in Nature Communications (2021)

  7. Article

    Open Access

    Convolutional neural network-assisted recognition of nanoscale L12 ordered structures in face-centred cubic alloys

    Nanoscale L12-type ordered structures are widely used in face-centered cubic (FCC) alloys to exploit their hardening capacity and thereby improve mechanical properties. These fine-scale particles are typically fu...

    Yue Li, Xuyang Zhou, Timoteo Colnaghi, Ye Wei, Andreas Marek in npj Computational Materials (2021)

  8. Article

    Open Access

    Adjuvant formulated virus-like particles expressing native-like forms of the Lassa virus envelope surface glycoprotein are immunogenic and induce antibodies with broadly neutralizing activity

    Lassa mammarenavirus (LASV) is a rodent-borne arenavirus endemic to several West African countries. It is the causative agent of human Lassa fever, an acute viral hemorrhagic fever disease. To date, no therapeuti...

    Helena Müller, Sarah Katharina Fehling, Jens Dorna, Richard A. Urbanowicz in npj Vaccines (2020)

  9. Article

    Open Access

    The Bacterial Product Violacein Exerts an Immunostimulatory Effect Via TLR8

    Violacein, an indole-derived, purple-colored natural pigment isolated from Chromobacterium violaceum has shown multiple biological activities. In this work, we studied the effect of violacein in different immune ...

    Francisco A. Venegas, Gabriele Köllisch, Kerstin Mark in Scientific Reports (2019)

  10. Article

    Open Access

    Correction to: Functional characterization of genes mediating cell wall metabolism and responses to plant cell wall integrity impairment

    Following publication of the original article [1], the author reported that the two curves in the sub-diagram WSR4 in Fig. 2a should be the other way round.

    Timo Engelsdorf, Lars Kjaer, Nora Gigli-Bisceglia, Lauri Vaahtera in BMC Plant Biology (2019)

  11. Article

    Open Access

    Functional characterization of genes mediating cell wall metabolism and responses to plant cell wall integrity impairment

    Plant cell walls participate in all plant-environment interactions. Maintaining cell wall integrity (CWI) during these interactions is essential. This realization led to increased interest in CWI and resulted ...

    Timo Engelsdorf, Lars Kjaer, Nora Gigli-Bisceglia, Lauri Vaahtera in BMC Plant Biology (2019)

  12. Article

    Open Access

    Correction to: Metallurgical aspects of joining commercially pure titanium to Ti-6Al-4V alloy in a T-joint configuration by laser beam welding

    The article Metallurgical aspects of joining commercially pure titanium to Ti-6Al-4V alloy in a T-joint configuration by laser beam welding by Fedor Fomin, Martin Froend, Volker Ventzke, Pedro Alvarez, Stefan ...

    Fedor Fomin, Martin Froend, Volker Ventzke in The International Journal of Advanced Manu… (2018)

  13. Article

    Open Access

    Metallurgical aspects of joining commercially pure titanium to Ti-6Al-4V alloy in a T-joint configuration by laser beam welding

    The present paper focuses on the metallurgical and microstructural characterization of the laser beam-welded T-joints between commercially pure titanium (CP-Ti) and Ti-6Al-4V alloy. The weld regions were compr...

    Fedor Fomin, Martin Froend, Volker Ventzke in The International Journal of Advanced Manu… (2018)

  14. Article

    Open Access

    Correction to: Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes

    The authors noticed an accidental calculation error existing in Fig. 4C of this article [1]. The given velocities of the GAT-1 transporter (in this figure only) were mistakenly listed 50-fold too high. Based on t...

    J. Philipp Benz, Ryan J. Protzko, Jonas M. S. Andrich in Biotechnology for Biofuels (2017)

  15. Article

    Open Access

    Programming mRNA decay to modulate synthetic circuit resource allocation

    Synthetic circuits embedded in host cells compete with cellular processes for limited intracellular resources. Here we show how funnelling of cellular resources, after global transcriptome degradation by the s...

    Ophelia S. Venturelli, Mika Tei, Stefan Bauer, Leanne Jade G. Chan in Nature Communications (2017)

  16. Chapter and Conference Paper

    MRI-Based Surgical Planning for Lumbar Spinal Stenosis

    The most common reason for spinal surgery in elderly patients is lumbar spinal stenosis (LSS). For LSS, treatment decisions based on clinical and radiological information as well as personal experience of the ...

    Gabriele Abbati, Stefan Bauer in Medical Image Computing and Computer Assis… (2017)

  17. Article

    Open Access

    Lignocellulose-derived thin stillage composition and efficient biological treatment with a high-rate hybrid anaerobic bioreactor system

    This study aims to chemically characterize thin stillage derived from lignocellulosic biomass distillation residues in terms of organic strength, nutrient, and mineral content. The feasibility of performing an...

    Margreet J. Oosterkamp, Celia Méndez-García, Chang-H. Kim in Biotechnology for Biofuels (2016)

  18. Article

    Open Access

    Clinical Evaluation of a Fully-automatic Segmentation Method for Longitudinal Brain Tumor Volumetry

    Information about the size of a tumor and its temporal evolution is needed for diagnosis as well as treatment of brain tumor patients. The aim of the study was to investigate the potential of a fully-automatic...

    Raphael Meier, Urspeter Knecht, Tina Loosli, Stefan Bauer in Scientific Reports (2016)

  19. Chapter and Conference Paper

    Digital Innovation and the Becoming of an Organizational Identity

    Today, companies often face rapid and substantial change of their business environment. To stay competitive, firms are forced to engage in continuous innovation of their products and services. Moreover, the di...

    Nikolaus Obwegeser, Stefan Bauer in HCI in Business, Government, and Organizat… (2016)

  20. Article

    Open Access

    Environment Has Little Effect on Biomass Biochemical Composition of Miscanthus × giganteus Across Soil Types, Nitrogen Fertilization, and Times of Harvest

    Efficient conversion of lignocellulosic feedstocks to ethanol will benefit from a consistent composition of supplied biomass. While composition or quality for a given feedstock is known to vary, the influence ...

    Rebecca A. Arundale, Stefan Bauer, Fernanda B. Haffner in BioEnergy Research (2015)

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