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  1. Article

    Open Access

    Correlating sugar transporter expression and activities to identify transporters for an orphan sugar substrate

    Filamentous fungi like Neurospora crassa are able to take up and metabolize important sugars present, for example, in agricultural and human food wastes. However, only a fraction of all putative sugar transporter...

    Elisabeth Tamayo, Basant Nada, Isabell Hafermann in Applied Microbiology and Biotechnology (2024)

  2. Article

    Open Access

    Unveiling a classical mutant in the context of the GH3 β-glucosidase family in Neurospora crassa

    Classical fungal mutant strains obtained by mutagenesis have helped to elucidate fundamental metabolic pathways in the past. In the filamentous fungus Neurospora crassa, the gluc-1 strain was isolated long ago an...

    Yuxin Zhang, Basant Nada, Scott E. Baker, James E. Evans, Chaoguang Tian in AMB Express (2024)

  3. Article

    Open Access

    Evaluation of Trichoderma isolates as biocontrol measure against Claviceps purpurea

    Claviceps purpurea causes ergot, a floral disease of major cereal crops, such as winter rye and winter triticale. The dark sclerotia formed by C. purpurea contain numerous toxic ergot alkaloids, which pose a majo...

    Pia Stange, Sophia Seidl, Tanja Karl in European Journal of Plant Pathology (2023)

  4. Article

    Open Access

    Press water from the mechanical drying of Douglas-fir wood chips has multiple beneficial effects on lignocellulolytic fungi

    The mechanical drying of wood chips is an innovative method that improves the heating value of sawmill by-products in an energy-efficient continuous process. The liquid that comes out of the wood chips as pres...

    Manfred J. Reppke, Rebecca Gerstner in Fungal Biology and Biotechnology (2022)

  5. Article

    Open Access

    Volatile organic compound patterns predict fungal trophic mode and lifestyle

    Fungi produce a wide variety of volatile organic compounds (VOCs), which play central roles in the initiation and regulation of fungal interactions. Here we introduce a global overview of fungal VOC patterns a...

    Yuan Guo, Werner Jud, Fabian Weikl, Andrea Ghirardo in Communications Biology (2021)

  6. Article

    Open Access

    Engineering cofactor supply and NADH-dependent d-galacturonic acid reductases for redox-balanced production of l-galactonate in Saccharomyces cerevisiae

    d-Galacturonic acid (GalA) is the major constituent of pectin-rich biomass, an abundant and underutilized agricultural byproduct. By one reductive step catalyzed by GalA reductases, GalA is converted to the pol.....

    Simon Harth, Jacqueline Wagner, Tamina Sens, Jun-yong Choe in Scientific Reports (2020)

  7. Article

    Open Access

    Comparative evaluation of Aspergillus niger strains for endogenous pectin-depolymerization capacity and suitability for d-galacturonic acid production

    Pectinaceous agricultural residues rich in d-galacturonic acid (d-GalA), such as sugar beet pulp, are considered as promising feedstocks for waste-to-value conversions. Aspergillus niger is known for its strong p...

    Dominik Schäfer, Kevin Schmitz, Dirk Weuster-Botz in Bioprocess and Biosystems Engineering (2020)

  8. Article

    Open Access

    Growing a circular economy with fungal biotechnology: a white paper

    Fungi have the ability to transform organic materials into a rich and diverse set of useful products and provide distinct opportunities for tackling the urgent challenges before all humans. Fungal biotechnolog...

    Vera Meyer, Evelina Y. Basenko, J. Philipp Benz in Fungal Biology and Biotechnology (2020)

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  10. No Access

    Article

    Spotlight on fungal pectin utilization—from phytopathogenicity to molecular recognition and industrial applications

    Pectin is a complex polysaccharide with d-galacturonic acid as its main component that predominantly accumulates in the middle lamella of the plant cell wall. Integrity and depolymerization of pectic structures h...

    Kevin Schmitz, Ryan Protzko, Lisha Zhang in Applied Microbiology and Biotechnology (2019)

  11. Article

    Open Access

    Engineering Saccharomyces cerevisiae for co-utilization of d-galacturonic acid and d-glucose from citrus peel waste

    Pectin-rich biomasses, such as citrus peel and sugar beet pulp, hold promise as inexpensive feedstocks for microbial fermentations as enzymatic hydrolysis of their component polysaccharides can be accomplished...

    Ryan J. Protzko, Luke N. Latimer, Ze Martinho, Elise de Reus in Nature Communications (2018)

  12. Article

    Open Access

    Genome Sequencing and analyses of Two Marine Fungi from the North Sea Unraveled a Plethora of Novel Biosynthetic Gene Clusters

    Marine Fungi are potent secondary metabolite producers. However, limited genetic information are available their biosynthetic gene clusters (BGCs) and their biotechnological applications. To overcome this lack...

    Abhishek Kumar, Jens Laurids Sørensen, Frederik Teilfeldt Hansen in Scientific Reports (2018)

  13. Article

    Open Access

    Correction to: Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes

    The authors noticed an accidental calculation error existing in Fig. 4C of this article [1]. The given velocities of the GAT-1 transporter (in this figure only) were mistakenly listed 50-fold too high. Based on t...

    J. Philipp Benz, Ryan J. Protzko, Jonas M. S. Andrich in Biotechnology for Biofuels (2017)

  14. No Access

    Article

    HPAEC-PAD for oligosaccharide analysis—novel insights into analyte sensitivity and response stability

    The rising importance of accurately detecting oligosaccharides in biomass hydrolyzates or as ingredients in food, such as in beverages and infant milk products, demands for the availability of tools to sensiti...

    Matthias Mechelke, Jonathan Herlet in Analytical and Bioanalytical Chemistry (2017)

  15. Article

    Open Access

    Comparing the physiochemical parameters of three celluloses reveals new insights into substrate suitability for fungal enzyme production

    The industrial applications of cellulases are mostly limited by the costs associated with their production. Optimized production pathways are therefore desirable. Based on their enzyme inducing capacity, cellu...

    Lara Hassan, Manfred J. Reppke, Nils Thieme in Fungal Biology and Biotechnology (2017)

  16. Article

    Open Access

    Network reconstruction and systems analysis of plant cell wall deconstruction by Neurospora crassa

    Plant biomass degradation by fungal-derived enzymes is rapidly expanding in economic importance as a clean and efficient source for biofuels. The ability to rationally engineer filamentous fungi would facilita...

    Areejit Samal, James P. Craig, Samuel T. Coradetti in Biotechnology for Biofuels (2017)

  17. Article

    Open Access

    The transcription factor PDR-1 is a multi-functional regulator and key component of pectin deconstruction and catabolism in Neurospora crassa

    Pectin is an abundant component in many fruit and vegetable wastes and could therefore be an excellent resource for biorefinery, but is currently underutilized. Fungal pectinases already play a crucial role fo...

    Nils Thieme, Vincent W. Wu, Axel Dietschmann, Asaf A. Salamov in Biotechnology for Biofuels (2017)

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    Chapter

    The Renaissance of Neurospora crassa: How a Classical Model System is Used for Applied Research

    One major focus in fungal biotechnological research is the elucidation of plant biomass degradation. Filamentous fungi have the capacity to produce large amounts of enzymes for lignocellulose deconstruction th...

    Tanja Seibert M.Sc., Nils Thieme M.Sc. in Gene Expression Systems in Fungi: Advancem… (2016)

  19. Article

    Open Access

    Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes

    Pectin-rich agricultural wastes potentially represent favorable feedstocks for the sustainable production of alternative energy and bio-products. Their efficient utilization requires the conversion of all majo...

    J Philipp Benz, Ryan J Protzko, Jonas MS Andrich in Biotechnology for Biofuels (2014)

  20. Article

    Open Access

    Tic20 forms a channel independent of Tic110 in chloroplasts

    The Tic complex (Translocon at the inner envelope membrane of chloroplasts) mediates the translocation of nuclear encoded chloroplast proteins across the inner envelope membrane. Tic110 forms one prominent protei...

    Erika Kovács-Bogdán, J Philipp Benz, Jürgen Soll, Bettina Bölter in BMC Plant Biology (2011)