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  1. Article

    Open Access

    Cellular heterogeneity of pluripotent stem cell-derived cardiomyocyte grafts is mechanistically linked to treatable arrhythmias

    Preclinical data have confirmed that human pluripotent stem cell-derived cardiomyocytes (PSC-CMs) can remuscularize the injured or diseased heart, with several clinical trials now in planning or recruitment st...

    Dinesh Selvakumar, Zoe E. Clayton, Andrew Prowse in Nature Cardiovascular Research (2024)

  2. Article

    Open Access

    A village in a dish model system for population-scale hiPSC studies

    The mechanisms by which DNA alleles contribute to disease risk, drug response, and other human phenotypes are highly context-specific, varying across cell types and different conditions. Human induced pluripot...

    Drew R. Neavin, Angela M. Steinmann, Nona Farbehi, Han Sheng Chiu in Nature Communications (2023)

  3. No Access

    Chapter

    Analysing Genetic Programs of Cell Differentiation to Study Cardiac Cell Diversification

    Developmental cell lineages are first specified at the point of gastrulation, a process involving precise control of timing and dosage of signalling pathways required to guide differentiation into all cell typ...

    Zhixuan Wu, Sophie Shen, Yuliangzi Sun in Advanced Technologies in Cardiovascular Bi… (2022)

  4. Article

    Open Access

    Elp2 mutations perturb the epitranscriptome and lead to a complex neurodevelopmental phenotype

    Intellectual disability (ID) and autism spectrum disorder (ASD) are the most common neurodevelopmental disorders and are characterized by substantial impairment in intellectual and adaptive functioning, with t...

    Marija Kojic, Tomasz Gawda, Monika Gaik, Alexander Begg in Nature Communications (2021)

  5. Article

    Open Access

    Single cell eQTL analysis identifies cell type-specific genetic control of gene expression in fibroblasts and reprogrammed induced pluripotent stem cells

    The discovery that somatic cells can be reprogrammed to induced pluripotent stem cells (iPSCs) has provided a foundation for in vitro human disease modelling, drug development and population genetics studies. ...

    Drew Neavin, Quan Nguyen, Maciej S. Daniszewski, Helena H. Liang in Genome Biology (2021)

  6. Article

    Open Access

    Genotype-free demultiplexing of pooled single-cell RNA-seq

    A variety of methods have been developed to demultiplex pooled samples in a single cell RNA sequencing (scRNA-seq) experiment which either require hashtag barcodes or sample genotypes prior to pooling. We intr...

    Jun Xu, Caitlin Falconer, Quan Nguyen, Joanna Crawford, Brett D. McKinnon in Genome Biology (2019)

  7. Article

    Open Access

    A transcribed enhancer dictates mesendoderm specification in pluripotency

    Enhancers and long noncoding RNAs (lncRNAs) are key determinants of lineage specification during development. Here, we evaluate remodeling of the enhancer landscape and modulation of the lncRNA transcriptome d...

    Michael Alexanian, Daniel Maric, Stephen P. Jenkinson, Marco Mina in Nature Communications (2017)

  8. No Access

    Article

    Generating high-purity cardiac and endothelial derivatives from patterned mesoderm using human pluripotent stem cells

    Different concentrations of activin A and BMP4 are used to polarize stem cells into mesodermal subtypes that reflect mid-primitive-streak cardiogenic mesoderm and posterior-primitive-streak hemogenic mesoderm.

    Nathan J Palpant, Lil Pabon, Clayton E Friedman, Meredith Roberts in Nature Protocols (2017)

  9. Article

    Open Access

    Erratum to: Statistically based splicing detection reveals neural enrichment and tissue-specific induction of circular RNA during human fetal development

    Linda Szabo, Robert Morey, Nathan J. Palpant, Peter L. Wang in Genome Biology (2016)

  10. Article

    Open Access

    Statistically based splicing detection reveals neural enrichment and tissue-specific induction of circular RNA during human fetal development

    The pervasive expression of circular RNA is a recently discovered feature of gene expression in highly diverged eukaryotes, but the functions of most circular RNAs are still unknown. Computational methods to d...

    Linda Szabo, Robert Morey, Nathan J. Palpant, Peter L. Wang in Genome Biology (2015)

  11. No Access

    Article

    Human embryonic-stem-cell-derived cardiomyocytes regenerate non-human primate hearts

    Regeneration of the heart muscle after myocardial infarction with cardiomyocytes derived from human embryonic stem cells is demonstrated in non-human primates, with the grafts showing evidence of electromechan...

    James J. H. Chong, **ulan Yang, Creighton W. Don, Elina Minami, Yen-Wen Liu in Nature (2014)

  12. No Access

    Protocol

    Methods for Assessing the Electromechanical Integration of Human Pluripotent Stem Cell-Derived Cardiomyocyte Grafts

    Cardiomyocytes derived from human pluripotent stem cells show tremendous promise for the replacement of myocardium and contractile function lost to infarction. However, until recently, no methods were availabl...

    Wei-Zhong Zhu, Dominic Filice, Nathan J. Palpant in Cardiac Tissue Engineering (2014)

  13. No Access

    Article

    Human ES-cell-derived cardiomyocytes electrically couple and suppress arrhythmias in injured hearts

    A guinea-pig model of cardiac injury is used to show that human embryonic stem-cell-derived cardiomyocyte grafts can electrically integrate into the injured heart, improving mechanical function and reducing sp...

    Yuji Shiba, Sarah Fernandes, Wei-Zhong Zhu, Dominic Filice, Veronica Muskheli in Nature (2012)

  14. No Access

    Article

    Reprogramming the injured heart

    When the heart is injured, the muscle does not regenerate and scars are produced. This process can be attenuated in the hearts of live mice by forcing scar-forming cells to become muscle cells. See Articles ...

    Nathan J. Palpant, Charles E. Murry in Nature (2012)