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  1. Article

    Open Access

    Novel subtypes of severe COVID-19 respiratory failure based on biological heterogeneity: a secondary analysis of a randomized controlled trial

    Despite evidence associating inflammatory biomarkers with worse outcomes in hospitalized adults with COVID-19, trials of immunomodulatory therapies have met with mixed results, likely due in part to biological...

    Narges Alipanah-Lechner, James Hurst-Hopf, Kevin Delucchi, Lamorna Swigart in Critical Care (2024)

  2. Article

    Open Access

    Quantitative PET imaging of the CD4 pool in nonhuman primates

    Previous SPECT and PET semi-quantitative in vivo imaging studies in monkeys have demonstrated specific uptake of radiolabeled rhesus recombinant anti-CD4 monoclonal antibody fragment CD4R1-F(ab΄)2 in the spleen a...

    Insook Kim, Sharat Srinivasula in European Journal of Nuclear Medicine and M… (2022)

  3. Article

    Open Access

    Plasma SARS-CoV-2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized COVID-19

    Studies quantifying SARS-CoV-2 have focused on upper respiratory tract or plasma viral RNA with inconsistent association with clinical outcomes. The association between plasma viral antigen levels and clinical...

    Katherine D. Wick, Aleksandra Leligdowicz, Andrew Willmore in Critical Care (2022)

  4. Article

    Open Access

    Correction to: Partnership for Research on Ebola VACcination (PREVAC): protocol of a randomized, double-blind, placebo-controlled phase 2 clinical trial evaluating three vaccine strategies against Ebola in healthy volunteers in four West African countries

    Moses Badio, Edouard Lhomme, Mark Kieh, Abdoul Habib Beavogui, Stephen B. Kennedy in Trials (2021)

  5. Article

    Open Access

    Partnership for Research on Ebola VACcination (PREVAC): protocol of a randomized, double-blind, placebo-controlled phase 2 clinical trial evaluating three vaccine strategies against Ebola in healthy volunteers in four West African countries

    The Ebola virus disease (EVD) outbreak in 2014–2016 in West Africa was the largest on record and provided an opportunity for large clinical trials and accelerated efforts to develop an effective and safe preve...

    Moses Badio, Edouard Lhomme, Mark Kieh, Abdoul Habib Beavogui, Stephen B. Kennedy in Trials (2021)

  6. Article

    Open Access

    Brain 18F-FDG PET of SIV-infected macaques after treatment interruption or initiation

    Although rates of severe HIV-associated neurocognitive disorders have declined in the post-antiretroviral treatment (ART) era, subtle deficits persist, possibly exacerbated by treatment non-adherence. The actu...

    William Schreiber-Stainthorp, Sanhita Sinharay in Journal of Neuroinflammation (2018)

  7. Article

    Open Access

    Interleukin-27 Enhances the Potential of Reactive Oxygen Species Generation from Monocyte-derived Macrophages and Dendritic cells by Induction of p47phox

    Interleukin (IL)-27, a member of the IL-12 cytokine family, plays an important and diverse role in the function of the immune system. We have previously demonstrated that IL-27 is an anti-viral cytokine which ...

    Bharatwaj Sowrirajan, Yoshiro Saito, Deepak Poudyal, Qian Chen in Scientific Reports (2017)

  8. Article

    Open Access

    Rapid Recall Ability of Memory T cells is Encoded in their Epigenome

    Even though T-cell receptor (TCR) stimulation together with co-stimulation is sufficient for the activation of both naïve and memory T cells, the memory cells are capable of producing lineage specific cytokine...

    Artem Barski, Suresh Cuddapah, Andrey V. Kartashov, Chong Liu in Scientific Reports (2017)

  9. Article

    Open Access

    Epigenetic regulation of gene expression and cellular differentiation

    Artem Barski, Suresh Cuddapah, Andrey V Kartashov, Hiromi Imamichi in Molecular Pain (2014)

  10. Article

    Open Access

    HIV-1 infected monozygotic twins: a tale of two outcomes

    Replicate experiments are often difficult to find in evolutionary biology, as this field is inherently an historical science. However, viruses, bacteria and phages provide opportunities to study evolution in b...

    Loubna Tazi, Hiromi Imamichi, Steven Hirschfeld in BMC Evolutionary Biology (2011)

  11. No Access

    Article

    Getting personal about treating HIV

    Genetic variants have been identified that may predict the response to HIV treatment (pages 413–420).

    James D Neaton, H Clifford Lane in Nature Medicine (2008)

  12. Article

    Open Access

    DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis

    Due to the complex and distributed nature of biological research, our current biological knowledge is spread over many redundant annotation databases maintained by many independent groups. Analysts usually nee...

    Brad T Sherman, Da Wei Huang, Qina Tan, Yongjian Guo, Stephan Bour in BMC Bioinformatics (2007)

  13. Article

    Open Access

    The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists

    The DAVID Gene Functional Classification Tool http://david.abcc.ncifcrf.gov uses a novel agglomeration algorithm to condense a list of genes or associated bi...

    Da Wei Huang, Brad T Sherman, Qina Tan, Jack R Collins, W Gregory Alvord in Genome Biology (2007)

  14. Article

    Reports on nevirapine threaten public health

    H Clifford Lane, Gregory K Folkers, Anthony S Fauci in Nature Medicine (2005)

  15. Article

    Identifying biological themes within lists of genes with EASE

    EASE is a customizable software application for rapid biological interpretation of gene lists that result from the analysis of microarray, proteomics, SAGE and other high-throughput genomic data. The biologica...

    Douglas A Hosack, Glynn Dennis Jr, Brad T Sherman, H Clifford Lane in Genome Biology (2003)

  16. Article

    DAVID: Database for Annotation, Visualization, and Integrated Discovery

    The distributed nature of biological knowledge poses a major challenge to the interpretation of genome-scale datasets, including those derived from microarray and proteomic studies. This report describes DAVID...

    Glynn Dennis Jr, Brad T Sherman, Douglas A Hosack, Jun Yang, Wei Gao in Genome Biology (2003)

  17. Article

    Identifying biological themes within lists of genes with EASE

    EASE is a customizable software application for rapid biological interpretation of gene lists that result from the analysis of microarray, proteomics, SAGE, and other high-throughput genomic data. The biologic...

    Douglas A Hosack, Glynn Dennis Jr, Brad T Sherman, H Clifford Lane in Genome Biology (2003)

  18. Article

    DAVID: Database for Annotation, Visualization, and Integrated Discovery

    Functional annotation of differentially expressed genes is a necessary and critical step in the analysis of microarray data. The distributed nature of biological knowledge frequently requires researchers to na...

    Glynn Dennis Jr, Brad T Sherman, Douglas A Hosack, Jun Yang, Wei Gao in Genome Biology (2003)

  19. Article

    Bioterrorism: A clear and present danger

    The anthrax attacks in the United States, juxtaposed against the September 11 terrorist attacks on New York and Washington, DC, have transformed a theoretical threat to stark reality. The biomedical research c...

    H. Clifford Lane, John La Montagne, Anthony S. Fauci in Nature Medicine (2001)

  20. No Access

    Chapter

    Immunologic Approaches to the Therapy of Patients with HIV Infection

    The primary modality of therapy for patients with human immunodeficiency virus (HIV) infection is the use of combination antiretroviral chemotherapy to suppress HIV replication. As has been clearly established...

    H. Clifford Lane, Scott Seeley in Retroviral Immunology (2001)

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