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  1. Article

    Open Access

    Isoform-resolved transcriptome of the human preimplantation embryo

    Human preimplantation development involves extensive remodeling of RNA expression and splicing. However, its transcriptome has been compiled using short-read sequencing data, which fails to capture most full-l...

    Denis Torre, Nancy J. Francoeur, Yael Kalma, Ilana Gross Carmel in Nature Communications (2023)

  2. Article

    Open Access

    New insights regarding origin of monosomy occurrence in early develo** embryos as demonstrated in preimplantation genetic testing

    Analyses of miscarriage products indicate that the majority of aneuploidies in early develo** embryos derive from errors occurring during maternal meiosis and the paternal contribution is less than 10%. Our ...

    N. Samara, S. Peleg, T. Frumkin, V. Gold, H. Amir in Molecular Cytogenetics (2022)

  3. No Access

    Article

    Gonadotropin-Releasing Hormone Agonist Versus Recombinant Human Chorionic Gonadotropin Triggering in Fertility Preservation Cycles

    The purpose of this research is to study the efficacy of GnRH-a versus r-hCG triggering in patients who go through fertility preservation cycles. This retrospective cohort study was performed in a tertiary uni...

    Einat Haikin Herzberger, Sabaa Knaneh, Hadar Amir, Adi Reches in Reproductive Sciences (2021)

  4. Article

    Open Access

    Heterozygous APC germline mutations impart predisposition to colorectal cancer

    Familial adenomatous polyposis (FAP) is an inherited syndrome caused by a heterozygous adenomatous polyposis coli (APC) germline mutation, associated with a profound lifetime risk for colorectal cancer. While ...

    Livia Preisler, Aline Habib, Guy Shapira, Liron Kuznitsov-Yanovsky in Scientific Reports (2021)

  5. No Access

    Chapter and Conference Paper

    Developmental Stage Classification of Embryos Using Two-Stream Neural Network with Linear-Chain Conditional Random Field

    The developmental process of embryos follows a monotonic order. An embryo can progressively cleave from one cell to multiple cells and finally transform to morula and blastocyst. For time-lapse videos of embry...

    Stanislav Lukyanenko, Won-Dong Jang in Medical Image Computing and Computer Assis… (2021)

  6. Article

    The National Autism Database of Israel: a Resource for Studying Autism Risk Factors, Biomarkers, Outcome Measures, and Treatment Efficacy

    Ilan Dinstein, Ayelet Arazi, Hava M. Golan in Journal of Molecular Neuroscience (2020)

  7. No Access

    Chapter and Conference Paper

    Automated Measurements of Key Morphological Features of Human Embryos for IVF

    A major challenge in clinical In-Vitro Fertilization (IVF) is selecting the highest quality embryo to transfer to the patient in the hopes of achieving a pregnancy. Time-lapse microscopy provides clinicians wi...

    Brian D. Leahy, Won-Dong Jang, Helen Y. Yang in Medical Image Computing and Computer Assis… (2020)

  8. No Access

    Article

    Time-lapse imaging reveals delayed development of embryos carrying unbalanced chromosomal translocations

    The purpose of the study was to compare the morphokinetic parameters of embryos carrying balanced chromosomal translocations with those carrying unbalanced chromosomal translocations using time-lapse microscopy.

    Hadar Amir, Shiri Barbash-Hazan, Yael Kalma in Journal of Assisted Reproduction and Genet… (2019)

  9. No Access

    Book

  10. No Access

    Protocol

    Imaging of Somatic Ca2+ Transients in Differentiated Human Neurons

    Calcium is a major regulator of neuronal activity and calcium signaling is critically important for normal neuronal function. Ca imaging is a well-established tool for studying neuronal function and ongoing sp...

    Irena Vertkin, Dalit Ben-Yosef in Fragile-X Syndrome (2019)

  11. No Access

    Protocol

    Modeling FXS: Human Pluripotent Stem Cells and In Vitro Neural Differentiation

    In fragile X syndrome (FXS) embryos FMRP is widely expressed during early stages of embryogenesis however it is inactivated by the end of the first trimester. In the same manner, human embryonic stem cell (hES...

    Liron Kuznitsov-Yanovsky, Yoav Mayshar, Dalit Ben-Yosef in Fragile-X Syndrome (2019)

  12. No Access

    Article

    Complex chromosomal rearrangement—a lesson learned from PGS

    The aim of the study is to report a case of non-diagnosed complex chromosomal rearrangement (CCR) identified by preimplantation genetic screening (PGS) followed by preimplantation genetic diagnosis (PGD) which...

    Tsvia Frumkin, Sagit Peleg, Veronica Gold in Journal of Assisted Reproduction and Genet… (2017)

  13. Article

    Open Access

    Improving preimplantation genetic diagnosis (PGD) reliability by selection of sperm donor with the most informative haplotype

    The study is aimed to describe a novel strategy that increases the accuracy and reliability of PGD in patients using sperm donation by pre-selecting the donor whose haplotype does not overlap the carrier’s one.

    Mira Malcov, Veronica Gold, Sagit Peleg in Reproductive Biology and Endocrinology (2017)

  14. Article

    Open Access

    The effect of a germline mutation in the APC gene on β-catenin in human embryonic stem cells

    Most cases of colorectal cancer (CRC) are initiated by inactivation mutations in the APC gene, which is a negative regulator of the Wnt-β-catenin pathway. Patients with familial adenomatous polyposis (FAP) inh...

    Nofar Yedid, Yael Kalma, Mira Malcov, Ami Amit, Revital Kariv, Michal Caspi in BMC Cancer (2016)

  15. No Access

    Article

    Impaired function of trophoblast cells derived from translocated hESCs may explain pregnancy loss in women with balanced translocation (11;22)

    The aim of the study was to study whether the trophoblasts carrying unbalanced translocation 11,22 [t(11;12)] display abnormal expression of trophoblastic genes and impaired functional properties that may expl...

    Alina Shpiz, Dalit Ben-Yosef, Yael Kalma in Journal of Assisted Reproduction and Genetics (2016)

  16. No Access

    Article

    Blastomere biopsy for PGD delays embryo compaction and blastulation: a time-lapse microscopic analysis

    The purpose of the study was to explore the effect of blastomere biopsy for preimplantation genetic diagnosis (PGD) on the embryos’ dynamics, further cleavage, development, and implantation.

    Liron Bar-El, Yael Kalma, Mira Malcov in Journal of Assisted Reproduction and Genet… (2016)

  17. Article

    Correction: Corrigendum: Derivation of novel human ground state naive pluripotent stem cells

    Nature 504, 282–286 (2013); doi:10.1038/nature12745 The reduced representation bisulphite sequencing (RRBS) data generated and analysed in this Letter were not originally uploaded to the Gene Expression Omnibu...

    Ohad Gafni, Leehee Weinberger, Abed AlFatah Mansour, Yair S. Manor, Elad Chomsky in Nature (2015)

  18. No Access

    Article

    Modeling Neurodevelopmental Disorders Using Human Pluripotent Stem Cells

    Neurodevelopmental disorders (NDs) are impairments that affect the development and growth of the brain and the central nervous system during embryonic and early postnatal life. Genetically manipulated animals ...

    Michael Telias, Dalit Ben-Yosef in Stem Cell Reviews and Reports (2014)

  19. No Access

    Article

    Derivation of novel human ground state naive pluripotent stem cells

    It is known that human embryonic stem (ES) cells are more similar to mouse primed epiblast stem cells than to naive mouse ES cells; here culture conditions are determined that allow human ES and induced plurip...

    Ohad Gafni, Leehee Weinberger, Abed AlFatah Mansour, Yair S. Manor, Elad Chomsky in Nature (2013)

  20. No Access

    Protocol

    Mutated Human Embryonic Stem Cells for the Study of Human Genetic Disorders

    Human embryonic stem cells (HESCs) are of great interest in biology and medicine due to their ability to grow indefinitely in culture while maintaining their ability to differentiate into all different cell ty...

    Ahmi Ben-Yehudah, Mira Malcov, Tsvia Frumkin in Human Embryonic Stem Cells Handbook (2012)

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