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  1. No Access

    Article

    Introducing the Lipidomics Minimal Reporting Checklist

    The rapid increase in lipidomic data has triggered a community-based movement to develop guidelines and minimum requirements for generating, reporting and publishing lipidomic data. The creation of a dynamic c...

    Jeffrey G. McDonald, Christer S. Ejsing, Dominik Kopczynski in Nature Metabolism (2022)

  2. Article

    Open Access

    Reference materials for MS-based untargeted metabolomics and lipidomics: a review by the metabolomics quality assurance and quality control consortium (mQACC)

    The metabolomics quality assurance and quality control consortium (mQACC) is enabling the identification, development, prioritization, and promotion of suitable reference materials (RMs) to be used in quality ...

    Katrice A. Lippa, Juan J. Aristizabal-Henao, Richard D. Beger in Metabolomics (2022)

  3. No Access

    Article

    Environmental lipidomics: understanding the response of organisms and ecosystems to a changing world

    Understanding the interaction between organisms and the environment is important for predicting and mitigating the effects of global phenomena such as climate change, and the fate, transport, and health effect...

    Jeremy P. Koelmel, Michael P. Napolitano, Candice Z. Ulmer in Metabolomics (2020)

  4. Article

    Open Access

    Software tool for internal standard based normalization of lipids, and effect of data-processing strategies on resulting values

    Lipidomics, the comprehensive measurement of lipids within a biological system or substrate, is an emerging field with significant potential for improving clinical diagnosis and our understanding of health and...

    Jeremy P. Koelmel, Jason A. Cochran, Candice Z. Ulmer in BMC Bioinformatics (2019)

  5. No Access

    Article

    Lipidomics for wildlife disease etiology and biomarker discovery: a case study of pansteatitis outbreak in South Africa

    Lipidomics is an emerging field with great promise for biomarker and mechanistic studies due to lipids diverse biological roles. Clinical research applying lipidomics is drastically increasing, with research m...

    Jeremy P. Koelmel, Candice Z. Ulmer, Susan Fogelson, Christina M. Jones in Metabolomics (2019)

  6. Article

    Open Access

    Increased adiposity, inflammation, metabolic disruption and dyslipidemia in adult male offspring of DOSS treated C57BL/6 dams

    Evidence indicates that obesity can be promoted by chemical ‘obesogens’ that drive adiposity, hunger, inflammation and suppress metabolism. Dioctyl sodium sulfosuccinate (DOSS), a lipid emulsifier and candidat...

    Alexis M. Temkin, Robert R. Bowers, Candice Z. Ulmer, Kayla Penta in Scientific Reports (2019)

  7. No Access

    Article

    NIST lipidomics workflow questionnaire: an assessment of community-wide methodologies and perspectives

    Efforts to harmonize lipidomic methodologies have been limited within the community. Here, we aimed to capitalize on the recent National Institute of Standards and Technology lipidomics interlaboratory compari...

    John A. Bowden, Candice Z. Ulmer, Christina M. Jones, Jeremy P. Koelmel in Metabolomics (2018)

  8. Article

    Open Access

    LipidMatch: an automated workflow for rule-based lipid identification using untargeted high-resolution tandem mass spectrometry data

    Lipids are ubiquitous and serve numerous biological functions; thus lipids have been shown to have great potential as candidates for elucidating biomarkers and pathway perturbations associated with disease. Me...

    Jeremy P. Koelmel, Nicholas M. Kroeger, Candice Z. Ulmer in BMC Bioinformatics (2017)

  9. Article

    Expanding Lipidome Coverage Using LC-MS/MS Data-Dependent Acquisition with Automated Exclusion List Generation

    Untargeted omics analyses aim to comprehensively characterize biomolecules within a biological system. Changes in the presence or quantity of these biomolecules can indicate important biological perturbations,...

    Jeremy P. Koelmel, Nicholas M. Kroeger in Journal of The American Society for Mass S… (2017)

  10. Article

    LipidPioneer : A Comprehensive User-Generated Exact Mass Template for Lipidomics

    Lipidomics, the comprehensive measurement of lipid species in a biological system, has promising potential in biomarker discovery and disease etiology elucidation. Advances in chromatographic separation, mass ...

    Candice Z. Ulmer, Jeremy P. Koelmel in Journal of The American Society for Mass S… (2017)

  11. No Access

    Protocol

    Global UHPLC/HRMS Lipidomics Workflow for the Analysis of Lymphocyte Suspension Cultures

    Untargeted cellular lipidomics workflows should include key steps on sample handing, cell rinsing, lipid extraction, reconstitution solvents, and parameters for UHPLC/HRMS analysis. The challenge with implemen...

    Candice Z. Ulmer, Richard A. Yost, Timothy J. Garrett in Lipidomics (2017)

  12. No Access

    Protocol

    A Robust Lipidomics Workflow for Mammalian Cells, Plasma, and Tissue Using Liquid-Chromatography High-Resolution Tandem Mass Spectrometry

    Lipids have been analyzed in applications including drug discovery, disease etiology elucidation, and natural products. The chemical and structural diversity of lipids requires a tailored lipidomics workflow f...

    Candice Z. Ulmer, Rainey E. Patterson, Jeremy P. Koelmel, Timothy J. Garrett in Lipidomics (2017)