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  1. Article

    Open Access

    Therapeutic mitigation of measles-like immune amnesia and exacerbated disease after prior respiratory virus infections in ferrets

    Measles cases have surged pre-COVID-19 and the pandemic has aggravated the problem. Most measles-associated morbidity and mortality arises from destruction of pre-existing immune memory by measles virus (MeV),...

    Robert M. Cox, Josef D. Wolf, Nicole A. Lieberman in Nature Communications (2024)

  2. Article

    Open Access

    Individualized microbiotas dictate the impact of dietary fiber on colitis sensitivity

    The observation that the intestinal microbiota is  central in the development of IBD suggests that dietary fiber, the microbiota’s primary source of nourishment, could play a central role in these diseases. Ac...

    Erica Bonazzi, Alexis Bretin, Lucile Vigué, Fuhua Hao, Andrew D. Patterson in Microbiome (2024)

  3. No Access

    Article

    Multi-omics analyses of the ulcerative colitis gut microbiome link Bacteroides vulgatus proteases with disease severity

    Ulcerative colitis (UC) is driven by disruptions in host–microbiota homoeostasis, but current treatments exclusively target host inflammatory pathways. To understand how host–microbiota interactions become dis...

    Robert H. Mills, Parambir S. Dulai, Yoshiki Vázquez-Baeza in Nature Microbiology (2022)

  4. Article

    Open Access

    Direct impact of commonly used dietary emulsifiers on human gut microbiota

    Epidemiologic evidence and animal studies implicate dietary emulsifiers in contributing to the increased prevalence of diseases associated with intestinal inflammation, including inflammatory bowel diseases an...

    Sabrine Naimi, Emilie Viennois, Andrew T. Gewirtz, Benoit Chassaing in Microbiome (2021)

  5. Article

    Open Access

    Impact of PepT1 deletion on microbiota composition and colitis requires multiple generations

    Numerous studies of knockout mice find impacts on microbiota composition that influence host phenotype. However, such differences can vanish when KO mice are compared directly to WT littermates, suggesting the...

    Emilie Viennois, Adani Pujada, Junsik Sung, Chunhua Yang in npj Biofilms and Microbiomes (2020)

  6. Article

    Open Access

    Sphingolipids produced by gut bacteria enter host metabolic pathways impacting ceramide levels

    Gut microbes are linked to host metabolism, but specific mechanisms remain to be uncovered. Ceramides, a type of sphingolipid (SL), have been implicated in the development of a range of metabolic disorders fro...

    Elizabeth L. Johnson, Stacey L. Heaver, Jillian L. Waters in Nature Communications (2020)

  7. Article

    Open Access

    Erythroid differentiation regulator-1 induced by microbiota in early life drives intestinal stem cell proliferation and regeneration

    Gut microbiota and their metabolites are instrumental in regulating intestinal homeostasis. However, early-life microbiota associated influences on intestinal development remain incompletely understood. Here w...

    Hirohito Abo, Benoit Chassaing, Akihito Harusato, Miguel Quiros in Nature Communications (2020)

  8. Article

    Open Access

    Flagellin-elicited adaptive immunity suppresses flagellated microbiota and vaccinates against chronic inflammatory diseases

    Alterations in gut microbiota composition are associated with metabolic syndrome and chronic inflammatory diseases such as inflammatory bowel disease. One feature of inflammation-associated gut microbiotas is ...

    Hao Q. Tran, Ruth E. Ley, Andrew T. Gewirtz, Benoit Chassaing in Nature Communications (2019)

  9. Article

    Open Access

    Dietary emulsifiers consumption alters anxiety-like and social-related behaviors in mice in a sex-dependent manner

    Dietary emulsifiers carboxylmethylcellulose (CMC) and polysorbate 80 (P80) alter the composition of the intestinal microbiota and induce chronic low-grade inflammation, ultimately leading to metabolic dysregul...

    Mary K. Holder, Nicole V. Peters, Jack Whylings in Scientific Reports (2019)

  10. Article

    Publisher Correction: Neonatal selection by Toll-like receptor 5 influences long-term gut microbiota composition

    In Fig. 1d of this Letter, the third group along should have been labelled ‘WT’ rather than ‘Tlr5’. This has been corrected online.

    Marcus Fulde, Felix Sommer, Benoit Chassaing, Kira van Vorst, Aline Dupont in Nature (2018)

  11. No Access

    Article

    Neonatal selection by Toll-like receptor 5 influences long-term gut microbiota composition

    Alterations in enteric microbiota are associated with several highly prevalent immune-mediated and metabolic diseases13, and experiments involving faecal transplants have indicated that such alterations have a c...

    Marcus Fulde, Felix Sommer, Benoit Chassaing, Kira van Vorst, Aline Dupont in Nature (2018)

  12. Article

    Open Access

    Effects of gut-derived endotoxin on anxiety-like and repetitive behaviors in male and female mice

    Gut dysbiosis is observed in several neuropsychiatric disorders exhibiting increases in anxiety behavior, and recent work suggests links between gut inflammation and such disorders. One source of this inflamma...

    Christopher T. Fields, Benoit Chassaing in Biology of Sex Differences (2018)

  13. Article

    Open Access

    Exposure to bacterial products lipopolysaccharide and flagellin and hepatocellular carcinoma: a nested case-control study

    Leakage of bacterial products across the gut barrier may play a role in liver diseases which often precede the development of liver cancer. However, human studies, particularly from prospective settings, are l...

    Veronika Fedirko, Hao Quang Tran, Andrew T. Gewirtz, Magdalena Stepien in BMC Medicine (2017)

  14. Article

    Correction: Corrigendum: Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome

    Nature 519, 92–96 (2015); doi:10.1038/nature14232 Some clarifications are provided to this Letter; these do not alter any of the central conclusions but, rather, are provided in the interests of transparency a...

    Benoit Chassaing, Omry Koren, Julia K. Goodrich, Angela C. Poole in Nature (2016)

  15. No Access

    Article

    Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome

    Emulsifying agents, which are common food additives in the human diet, induce low-grade inflammation and obesity/metabolic syndrome in mice, suggesting that further investigation into the potential impact of d...

    Benoit Chassaing, Omry Koren, Julia K. Goodrich, Angela C. Poole in Nature (2015)

  16. No Access

    Article

    Toward understanding and manipulating the gut microbiota

    New techniques have introduced unprecedented sensitivity to the investigation of the gut microbiota, enabling insights into the discrete contributions of select bacterial species and advancing our mechanistic ...

    Jesse D. Aitken, Andrew T. Gewirtz in Nature Reviews Gastroenterology & Hepatology (2013)

  17. Article

    Open Access

    Loss of function mutation in toll-like receptor-4 does not offer protection against obesity and insulin resistance induced by a diet high in trans fat in mice

    Toll-like receptor-4 (TLR4) triggers inflammatory signaling in response to microbial lipoploysaccharide. It has been reported that loss of TLR4 protected against saturated fat-induced inflammation and insulin ...

    Matam Vijay-Kumar, Jesse D Aitken, Frederic A Carvalho in Journal of Inflammation (2011)

  18. No Access

    Article

    Toll like receptor-5: protecting the gut from enteric microbes

    The intestine is normally colonized by a large and diverse commensal microbiota and is occasionally exposed to a variety of potential pathogens. In recent years, there has been substantial progress made in ide...

    Matam Vijay-Kumar, Jesse D. Aitken, Andrew T. Gewirtz in Seminars in Immunopathology (2008)

  19. No Access

    Article

    Tlr5 is not primarily associated with susceptibility to Salmonella Typhimurium infection in MOLF/Ei mice

    The extreme susceptibility to infection with Salmonella Typhimurium of wild-derived MOLF/Ei mice has been linked to one genomic region on Chromosome 1 (Ity3). A member of the Toll-like receptors family, Tlr5, loc...

    Isabelle Angers, Vanessa Sancho-Shimizu, Albert Descoteaux in Mammalian Genome (2006)

  20. No Access

    Article

    Intestinal epithelial cell regulation of mucosal inflammation

    The intestinal epithelium serves as one of human's primary interfaces with the outside world. This interface is very heavily colonized with bacteria and yet permits absorption of life-sustaining nutrients whil...

    Yimin Yu, Shanthi Sitaraman, Andrew T. Gewirtz in Immunologic Research (2004)

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