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  1. A deep learning model of tumor cell architecture elucidates response and resistance to CDK4/6 inhibitors

    Cyclin-dependent kinase 4 and 6 inhibitors (CDK4/6is) have revolutionized breast cancer therapy. However, <50% of patients have an objective...

    Sungjoon Park, Erica Silva, ... Trey Ideker in Nature Cancer
    Article Open access 05 March 2024
  2. Punch-excised explants of bovine mammary gland to model early immune response to infection

    Background

    Mammary gland (MG) infections (mastitis) are frequent diseases of dairy cows that affect milk quality, animal welfare and farming...

    Pablo Gomes Noleto, Florence B. Gilbert, ... Rodrigo Prado Martins in Journal of Animal Science and Biotechnology
    Article Open access 07 July 2023
  3. Porcine lung tissue slices: a culture model for PRCV infection and innate immune response investigations

    Respiratory coronaviruses (RCoVs) significantly threaten human health, necessitating the development of an ex vivo respiratory culture system for...

    Shuxian Li, Yabin Lu, ... Guangliang Liu in AMB Express
    Article Open access 16 May 2024
  4. DeepAEG: a model for predicting cancer drug response based on data enhancement and edge-collaborative update strategies

    Motivation

    The prediction of cancer drug response is a challenging subject in modern personalized cancer therapy due to the uncertainty of drug...

    Chuanqi Lao, Pengfei Zheng, ... Zhao Li in BMC Bioinformatics
    Article Open access 09 March 2024
  5. Synergistic Effect of Maternal Micronutrient Supplementation on ORFV DNA Vaccine Immune Response in a Pregnant Model

    Contagious ecthyma is a contagious zoonotic disease caused by the Orf virus that can infect farm animals and humans, but no vaccine is available for...

    Sohail Ahmed, Guiqiong Liu, ... Xun** Jiang in Biological Trace Element Research
    Article 14 June 2024
  6. A new scaffold-free tumoroid model provides a robust preclinical tool to investigate invasion and drug response in Renal Cell Carcinoma

    Clear cell Renal Cell Carcinoma (ccRCC) is one of the most prevalent kidney cancers, which is often asymptomatic and thus discovered at a metastatic...

    Irinka SĂ©raudie, Catherine Pillet, ... Odile Filhol in Cell Death & Disease
    Article Open access 22 September 2023
  7. A hierarchical Bayesian model to monitor pelagic larvae in response to environmental changes

    European anchovies and round sardinella play a crucial role, both ecological and commercial, in the Mediterranean Sea. In this paper, we investigate...

    Alessia Granata, Antonino Abbruzzo, ... Marco Torri in Environmental and Ecological Statistics
    Article Open access 05 June 2024
  8. Stability of a diffusive-delayed HCV infection model with general cell-to-cell incidence function incorporating immune response and cell proliferation

    In this work, we analyse the dynamics of a five-dimensional hepatitis C virus infection mathematical model including the spatial mobility of...

    Alexis Nangue, Yanick Junior Tchuimeni in Theory in Biosciences
    Article 12 July 2023
  9. Protective Effects of Peroxiredoxin 6 in Pro-Inflammatory Response Model Using Raw 264.7 Macrophages

    Abstract

    The aim of the work was to study effects of peroxiredoxin 6 (PRDX6), a recombinant antioxidant protein, on the level of pro-inflammatory...

    Svetlana B. Parfenyuk, Olga V. Glushkova, ... Elena G. Novoselova in Biochemistry (Moscow)
    Article 17 August 2023
  10. A prognostic model based on tumor microenvironment-related lncRNAs predicts therapy response in pancreatic cancer

    Pancreatic cancer is an aggressive malignant tumor with high mortality and a low survival rate. The immune and stromal cells that infiltrate in the...

    Jianzhong Lu, **hua Tan, **aoqing Yu in Functional & Integrative Genomics
    Article 10 January 2023
  11. A novel molecular subtypes and risk model based on inflammatory response-related lncrnas for bladder cancer

    Background

    Inflammation and long noncoding RNAs (lncRNAs) are gradually becoming important in the development of bladder cancer (BC). Nevertheless,...

    Fucai Tang, Jiahao Zhang, ... Zhaohui He in Hereditas
    Article Open access 13 August 2022
  12. Development of a risk model based on autophagy-related genes to predict survival and immunotherapy response in ovarian cancer

    Background

    Autophagy is a highly conserved cellular proteolytic process that can interact with innate immune signaling pathways to affect the growth...

    Yuwei Chen, Zhibo Deng, Yang Sun in Hereditas
    Article Open access 01 February 2023
  13. Optimal treatment placement for on-farm experiments: pseudo-Bayesian optimal designs with a linear response plateau model

    On-farm experiments are increasingly being used as their costs have decreased with technological advances in collecting, storing, and processing...

    Davood Poursina, B. Wade Brorsen, Dayton M. Lambert in Precision Agriculture
    Article 07 January 2024
  14. Unfolded Protein Response in Arabidopsis

    The unfolded protein response (UPR) is a highly regulated signaling pathway that is largely conserved across eukaryotes. It is essential for cell...
    Cristina Ruberti, Federica Brandizzi in The Plant Endoplasmic Reticulum
    Protocol 2024
  15. Lead Acetate-Injected Mice is an Animal Model for Extrapolation of Calcifying Response to Humans Due to Low Involvement of Bone Resorption

    Vascular calcification affects the prognosis of patients with renal failure. Bisphosphonates are regarded as candidate anti-calcifying drugs because...

    Shota Morikane, Koichi Ishida, ... Takashi Iwanaga in Calcified Tissue International
    Article 01 July 2024
  16. Aotus nancymaae model predicts human immune response to the placental malaria vaccine candidate VAR2CSA

    Placental malaria vaccines (PMVs) are being developed to prevent severe sequelae of placental malaria (PM) in pregnant women and their offspring. The...

    Justin Doritchamou, Morten A. Nielsen, ... Patrick E. Duffy in Lab Animal
    Article Open access 06 November 2023
  17. Modelling the response of common carp (Cyprinus carpio) to natural and managed flows using a stochastic population model

    Common carp ( Cyprinus carpio ; hereafter carp) is a highly invasive freshwater fish that has colonised river basins across the world causing...

    Charles R. Todd, John D. Koehn, ... Chris Bice in Biological Invasions
    Article 10 February 2024
  18. DualGCN: a dual graph convolutional network model to predict cancer drug response

    Background

    Drug resistance is a critical obstacle in cancer therapy. Discovering cancer drug response is important to improve anti-cancer drug...

    Tianxing Ma, Qiao Liu, ... Xuegong Zhang in BMC Bioinformatics
    Article Open access 15 April 2022
  19. Long-term antigen-specific immune response by an oncolytic adenovirus encoding SP-SA-E7-4-1BBL in HPV-16 cancer model

    Background

    To describe an oncolytic adenovirus (OAd) encoding SP-SA-E7-4-1BBL that is capable of inducing tumor regression in therapeutic assays....

    Alejandra G. Martinez-Perez, Rodolfo Garza-Morales, ... Odila Saucedo-Cardenas in Molecular Biology Reports
    Article 09 March 2024
  20. Evaluation of Sugarcane Yield Response to a Phosphate-Solubilizing Microbial Inoculant: Using an Aerial Imagery-Based Model

    The use of microbial inoculants has become an effective alternative for increasing crop yields, reducing production costs, and improving...

    Denize Palmito dos Santos, Artur Soares, ... Geraldo Magela de Almeida Cançado in Sugar Tech
    Article 16 October 2023
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