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  1. Article

    Open Access

    Co-localization of antibiotic resistance genes is widespread in the infant gut microbiome and associates with an immature gut microbial composition

    In environmental bacteria, the selective advantage of antibiotic resistance genes (ARGs) can be increased through co-localization with genes such as other ARGs, biocide resistance genes, metal resistance genes...

    Xuanji Li, Asker Brejnrod, Urvish Trivedi, Jakob Russel, Jonathan Thorsen in Microbiome (2024)

  2. Article

    Open Access

    Differential responses of the gut microbiome and resistome to antibiotic exposures in infants and adults

    Despite their crucial importance for human health, there is still relatively limited knowledge on how the gut resistome changes or responds to antibiotic treatment across ages, especially in the latter case. H...

    Xuanji Li, Asker Brejnrod, Jonathan Thorsen, Trine Zachariasen in Nature Communications (2023)

  3. Article

    Open Access

    Emergent bacterial community properties induce enhanced drought tolerance in Arabidopsis

    Drought severely restricts plant production and global warming is further increasing drought stress for crops. Much information reveals the ability of individual microbes affecting plant stress tolerance. Howe...

    Nan Yang, Joseph Nesme, Henriette Lyng Røder, Xuanji Li in npj Biofilms and Microbiomes (2021)

  4. Article

    Open Access

    A community resource for paired genomic and metabolomic data mining

    Genomics and metabolomics are widely used to explore specialized metabolite diversity. The Paired Omics Data Platform is a community initiative to systematically document links between metabolome and (meta)gen...

    Michelle A. Schorn, Stefan Verhoeven, Lars Ridder, Florian Huber in Nature Chemical Biology (2021)

  5. Article

    Open Access

    Environmental sha** of the bacterial and fungal community in infant bed dust and correlations with the airway microbiota

    From early life, children are exposed to a multitude of environmental exposures, which may be of crucial importance for healthy development. Here, the environmental microbiota may be of particular interest as ...

    Shashank Gupta, Mathis H. Hjelmsø, Jenni Lehtimäki, Xuanji Li in Microbiome (2020)

  6. Article

    Open Access

    The microbiome of captive hamadryas baboons

    The hamadryas baboon (Papio hamadryas) is a highly social primate that lives in complex multilevel societies exhibiting a wide range of group behaviors akin to humans. In contrast to the widely studied human micr...

    Xuanji Li, Urvish Trivedi, Asker Daniel Brejnrod, Gisle Vestergaard in Animal Microbiome (2020)

  7. No Access

    Article

    Bacterial resistance to arsenic protects against protist killing

    Protists kill their bacterial prey using toxic metals such as copper. Here we hypothesize that the metalloid arsenic has a similar role. To test this hypothesis, we examined intracellular survival of Escherichia ...

    **uli Hao, Xuanji Li, Chandan Pal, Jon Hobman, D. G. Joakim Larsson in BioMetals (2017)