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  1. No Access

    Article

    Corallococcus caeni sp. nov., a novel myxobacterium isolated from activated sludge

    Two myxobacterial strains (KH5-1T and NO1) were isolated from the activated sludge tanks treating municipal sewage wastewater in Japan. These strains were recognised as myxobacteria based on their phenotypic char...

    Shun Tomita, Ryosuke Nakai, Kyohei Kuroda, Hazuki Kurashita… in Archives of Microbiology (2024)

  2. Article

    Open Access

    Catabolism and interactions of uncultured organisms shaped by eco-thermodynamics in methanogenic bioprocesses

    Current understanding of the carbon cycle in methanogenic environments involves trophic interactions such as interspecies H2 transfer between organotrophs and methanogens. However, many metabolic processes are th...

    Masaru K. Nobu, Takashi Narihiro, Ran Mei, Yoichi Kamagata, Patrick K. H. Lee… in Microbiome (2020)

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  3. No Access

    Article

    Different Interspecies Electron Transfer Patterns during Mesophilic and Thermophilic Syntrophic Propionate Degradation in Chemostats

    Propionate is one of the major intermediates in anaerobic digestion of organic waste to CO2 and CH4. In methanogenic environments, propionate is degraded through a mutualistic interaction between symbiotic propio...

    Ya-Ting Chen, Yan Zeng, Hui-Zhong Wang, Dan Zheng, Yoichi Kamagata… in Microbial Ecology (2020)

  4. No Access

    Article

    Identification of novel potential acetate-oxidizing bacteria in thermophilic methanogenic chemostats by DNA stable isotope probing

    Syntrophic oxidization of acetate and propionate are both critical steps of methanogenesis during thermophilic anaerobic digestion. However, knowledge on syntrophic acetate-oxidizing bacteria (SAOB) and syntro...

    Dan Zheng, Hui-Zhong Wang, Min Gou… in Applied Microbiology and Biotechnology (2019)

  5. No Access

    Article

    Analysis of microbiota involved in the aged natural fermentation of indigo

    Although the indigo reduction process is performed via natural fermentation and maintained under open-air condition, the indigo-reducing reactions continue for 6 months (on average) or longer. Identifying the ...

    Takahiro Okamoto, Kenichi Aino… in World Journal of Microbiology and Biotechn… (2017)

  6. No Access

    Protocol

    Primers: Functional Genes and 16S rRNA Genes for Methanogens

    To date, a great number of oligonucleotide probes/primers targeting phylogenetic markers of methanogenic archaea (methanogens), such as 16S rRNA and the gene for the α-subunit of methyl-coenzyme M reductase (mcrA

    Takashi Narihiro, Yuji Sekiguchi in Hydrocarbon and Lipid Microbiology Protocols (2017)