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  1. Article

    Open Access

    The DEAD-box RNA helicase PfDOZI imposes opposing actions on RNA metabolism in Plasmodium falciparum

    In malaria parasites, the regulation of mRNA translation, storage and degradation during development and life-stage transitions remains largely unknown. Here, we functionally characterized the DEAD-box RNA hel...

    Hui Min, **aoying Liang, Chengqi Wang, Junling Qin in Nature Communications (2024)

  2. Article

    Open Access

    MalariaSED: a deep learning framework to decipher the regulatory contributions of noncoding variants in malaria parasites

    Malaria remains one of the deadliest infectious diseases. Transcriptional regulation effects of noncoding variants in this unusual genome of malaria parasites remain elusive. We developed a sequence-based, ab ...

    Chengqi Wang, Yibo Dong, Chang Li, Jenna Oberstaller, Min Zhang in Genome Biology (2023)

  3. Article

    Open Access

    A type II protein arginine methyltransferase regulates merozoite invasion in Plasmodium falciparum

    Protein arginine methyltransferases (PRMTs) regulate many important cellular processes, such as transcription and RNA processing in model organisms but their functions in human malaria parasites are not elucid...

    Amuza Byaruhanga Lucky, Chengqi Wang, Min Liu, **aoying Liang in Communications Biology (2023)

  4. Article

    Open Access

    A unique class of Zn2+-binding serine-based PBPs underlies cephalosporin resistance and sporogenesis in Clostridioides difficile

    Treatment with β-lactam antibiotics, particularly cephalosporins, is a major risk factor for Clostridioides difficile infection. These broad-spectrum antibiotics irreversibly inhibit penicillin-binding proteins (...

    Michael D. Sacco, Shaohui Wang, Swamy R. Adapa, **ujun Zhang in Nature Communications (2022)

  5. Article

    Open Access

    Probing the distinct chemosensitivity of Plasmodium vivax liver stage parasites and demonstration of 8-aminoquinoline radical cure activity in vitro

    Improved control of Plasmodium vivax malaria can be achieved with the discovery of new antimalarials with radical cure efficacy, including prevention of relapse caused by hypnozoites residing in the liver of pati...

    Steven P. Maher, Amélie Vantaux, Victor Chaumeau, Adeline C. Y. Chua in Scientific Reports (2021)

  6. Article

    Open Access

    The apicoplast link to fever-survival and artemisinin-resistance in the malaria parasite

    The emergence and spread of Plasmodium falciparum parasites resistant to front-line antimalarial artemisinin-combination therapies (ACT) threatens to erase the considerable gains against the disease of the last d...

    Min Zhang, Chengqi Wang, Jenna Oberstaller, Phaedra Thomas in Nature Communications (2021)

  7. Article

    Open Access

    Plasmodium vivax readiness to transmit: implication for malaria eradication

    The lack of a continuous long-term in vitro culture system for Plasmodium vivax severely limits our knowledge of pathophysiology of the most widespread malaria parasite. To gain direct understanding of P. vivax h...

    Swamy Rakesh Adapa, Rachel A. Taylor, Chengqi Wang in BMC Systems Biology (2019)

  8. Article

    Open Access

    GSK3 suppression upregulates β-catenin and c-Myc to abrogate KRas-dependent tumors

    Mutant KRas is a significant driver of human oncogenesis and confers resistance to therapy, underscoring the need to develop approaches that disable mutant KRas-driven tumors. Because targeting KRas directly h...

    Aslamuzzaman Kazi, Shengyan **ang, Hua Yang, Daniel Delitto in Nature Communications (2018)

  9. Article

    Open Access

    Altered expression of K13 disrupts DNA replication and repair in Plasmodium falciparum

    Plasmodium falciparum exhibits resistance to the artemisinin component of the frontline antimalarial treatment Artemisinin-based Combination Therapy in South East Asia. Millions of lives will be at risk if artemi...

    Justin Gibbons, Katrina A. Button-Simons, Swamy R. Adapa, Suzanne Li in BMC Genomics (2018)

  10. Article

    Open Access

    Unraveling the Plasmodium vivax sporozoite transcriptional journey from mosquito vector to human host

    Malaria parasites transmitted by mosquito bite are remarkably efficient in establishing human infections. The infection process requires roughly 30 minutes and is highly complex as quiescent sporozoites inject...

    Alison Roth, Swamy R. Adapa, Min Zhang, **angyun Liao, Vishal Saxena in Scientific Reports (2018)

  11. Article

    Open Access

    Author Correction: A comprehensive model for assessment of liver stage therapies targeting Plasmodium vivax and Plasmodium falciparum

    The original version of this Article contained an error in the spelling of Richard Thomson-Luque, which was incorrectly given as Richard Thomson Luque. This error has now been corrected in both the PDF and HTM...

    Alison Roth, Steven P. Maher, Amy J. Conway, Ratawan Ubalee in Nature Communications (2018)

  12. Article

    Open Access

    A comprehensive model for assessment of liver stage therapies targeting Plasmodium vivax and Plasmodium falciparum

    Malaria liver stages represent an ideal therapeutic target with a bottleneck in parasite load and reduced clinical symptoms; however, current in vitro pre-erythrocytic (PE) models for Plasmodium vivax and P. falc...

    Alison Roth, Steven P. Maher, Amy J. Conway, Ratawan Ubalee in Nature Communications (2018)

  13. Article

    Open Access

    Malaria infected red blood cells release small regulatory RNAs through extracellular vesicles

    The parasite Plasmodium falciparum causes the most severe form of malaria. Cell communication between parasites is an important mechanism to control population density and differentiation. The infected red blood ...

    Kehinde Adebayo Babatunde, Smart Mbagwu in Scientific Reports (2018)

  14. Article

    Erratum: Plasmodium falciparum CRK4 directs continuous rounds of DNA replication during schizogony

    Nature Microbiology 2, 17017 (2017); published online 17 February 2017; corrected 6 March 2017. In the version of this Letter originally published, the in-text citations to Supplementary Table 1 and Supplement...

    Markus Ganter, Jonathan M. Goldberg, Jeffrey D. Dvorin in Nature Microbiology (2017)

  15. No Access

    Article

    Plasmodium falciparum CRK4 directs continuous rounds of DNA replication during schizogony

    Plasmodium parasites, the causative agents of malaria, have evolved a unique cell division cycle in the clinically relevant asexual blood stage of infection1. DNA replication commences approximately halfway throu...

    Markus Ganter, Jonathan M. Goldberg, Jeffrey D. Dvorin in Nature Microbiology (2017)

  16. Article

    Trinitrobenzene sulfonic acid-induced intestinal injury in neonatal mice activates transcriptional networks similar to those seen in human necrotizing enterocolitis

    We have shown previously that enteral administration of 2, 4, 6-trinitrobenzene sulfonic acid in 10-d-old C57BL/6 pups produces an acute necrotizing enterocolitis with histopathological and inflammatory change...

    Krishnan MohanKumar, Kopperuncholan Namachivayam, Feng Cheng in Pediatric Research (2017)

  17. Article

    Open Access

    Subcellular and in-vivo Nano-Endoscopy

    Analysis of individual cells at the subcellular level is important for understanding diseases and accelerating drug discovery. Nanoscale endoscopes allow minimally invasive probing of individual cell interiors...

    Surya Venkatasekhar Cheemalapati, John Winskas, Hao Wang in Scientific Reports (2016)

  18. Article

    Open Access

    Punctuated chromatin states regulate Plasmodium falciparum antigenic variation at the intron and 2 kb upstream regions

    Understanding the regulation mechanism of var gene expression is crucial for explaining antigenic variation in Plasmodium falciparum. Recent work observed that while all var genes produce transcripts, only a few

    Chengqi Wang, Swamy R. Adapa, Justin Gibbons, Stephen Sutton in BMC Genomics (2016)

  19. Article

    Open Access

    Ancient human sialic acid variant restricts an emerging zoonotic malaria parasite

    Plasmodium knowlesi is a zoonotic parasite transmitted from macaques causing malaria in humans in Southeast Asia. Plasmodium parasites bind to red blood cell (RBC) surface receptors, many of which are sialylated....

    Selasi Dankwa, Caeul Lim, Amy K. Bei, Rays H. Y. Jiang in Nature Communications (2016)

  20. Article

    Open Access

    Chemogenomic profiling of Plasmodium falciparum as a tool to aid antimalarial drug discovery

    The spread of Plasmodium falciparum multidrug resistance highlights the urgency to discover new targets and chemical scaffolds. Unfortunately, lack of experimentally validated functional information about most P....

    Anupam Pradhan, Geoffrey H. Siwo, Naresh Singh, Brian Martens in Scientific Reports (2015)

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