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  1. Article

    Open Access

    Leveraging functional genomic annotations and genome coverage to improve polygenic prediction of complex traits within and between ancestries

    We develop a method, SBayesRC, that integrates genome-wide association study (GWAS) summary statistics with functional genomic annotations to improve polygenic prediction of complex traits. Our method is scala...

    Zhili Zheng, Shouye Liu, Julia Sidorenko, Ying Wang, Tian Lin in Nature Genetics (2024)

  2. Article

    Open Access

    Distinct and shared genetic architectures of gestational diabetes mellitus and type 2 diabetes

    Gestational diabetes mellitus (GDM) is a common metabolic disorder affecting more than 16 million pregnancies annually worldwide1,2. GDM is related to an increased lifetime risk of type 2 diabetes (T2D)13, with ...

    Amanda Elliott, Raymond K. Walters, Matti Pirinen, Mitja Kurki in Nature Genetics (2024)

  3. Article

    Open Access

    Mendelian imputation of parental genotypes improves estimates of direct genetic effects

    Effects estimated by genome-wide association studies (GWASs) include effects of alleles in an individual on that individual (direct genetic effects), indirect genetic effects (for example, effects of alleles i...

    Alexander I. Young, Seyed Moeen Nehzati, Stefania Benonisdottir in Nature Genetics (2022)

  4. Article

    Open Access

    Within-sibship genome-wide association analyses decrease bias in estimates of direct genetic effects

    Estimates from genome-wide association studies (GWAS) of unrelated individuals capture effects of inherited variation (direct effects), demography (population stratification, assortative mating) and relatives ...

    Laurence J. Howe, Michel G. Nivard, Tim T. Morris, Ailin F. Hansen in Nature Genetics (2022)

  5. Article

    Open Access

    Polygenic prediction of educational attainment within and between families from genome-wide association analyses in 3 million individuals

    We conduct a genome-wide association study (GWAS) of educational attainment (EA) in a sample of ~3 million individuals and identify 3,952 approximately uncorrelated genome-wide-significant single-nucleotide po...

    Aysu Okbay, Yeda Wu, Nancy Wang, Hariharan Jayashankar, Michael Bennett in Nature Genetics (2022)

  6. No Access

    Article

    Resource profile and user guide of the Polygenic Index Repository

    Polygenic indexes (PGIs) are DNA-based predictors. Their value for research in many scientific disciplines is growing rapidly. As a resource for researchers, we used a consistent methodology to construct PGIs ...

    Joel Becker, Casper A. P. Burik, Grant Goldman, Nancy Wang in Nature Human Behaviour (2021)

  7. Article

    Open Access

    Genomic analysis of diet composition finds novel loci and associations with health and lifestyle

    We conducted genome-wide association studies (GWAS) of relative intake from the macronutrients fat, protein, carbohydrates, and sugar in over 235,000 individuals of European ancestries. We identified 21 unique...

    S. Fleur W. Meddens, Ronald de Vlaming, Peter Bowers in Molecular Psychiatry (2021)

  8. Article

    Author Correction: Multi-trait analysis of genome-wide association summary statistics using MTAG

    In the version of the paper initially published, no competing interests were declared. The ‘Competing interests’ statement should have stated that B.M.N. is on the Scientific Advisory Board of Deep Genomics. T...

    Patrick Turley, Raymond K. Walters, Omeed Maghzian, Aysu Okbay in Nature Genetics (2019)

  9. Article

    Publisher Correction: Multi-trait analysis of genome-wide association summary statistics using MTAG

    An amendment to this paper has been published and can be accessed via a link at the top of the paper.

    Patrick Turley, Raymond K. Walters, Omeed Maghzian, Aysu Okbay in Nature Genetics (2019)

  10. No Access

    Article

    Identification of common genetic risk variants for autism spectrum disorder

    Autism spectrum disorder (ASD) is a highly heritable and heterogeneous group of neurodevelopmental phenotypes diagnosed in more than 1% of children. Common genetic variants contribute substantially to ASD susc...

    Jakob Grove, Stephan Ripke, Thomas D. Als, Manuel Mattheisen in Nature Genetics (2019)

  11. No Access

    Article

    Genome-wide association analyses of risk tolerance and risky behaviors in over 1 million individuals identify hundreds of loci and shared genetic influences

    Humans vary substantially in their willingness to take risks. In a combined sample of over 1 million individuals, we conducted genome-wide association studies (GWAS) of general risk tolerance, adventurousness,...

    Richard Karlsson Linnér, Pietro Biroli, Edward Kong, S. Fleur W. Meddens in Nature Genetics (2019)

  12. No Access

    Article

    Discovery of the first genome-wide significant risk loci for attention deficit/hyperactivity disorder

    Attention deficit/hyperactivity disorder (ADHD) is a highly heritable childhood behavioral disorder affecting 5% of children and 2.5% of adults. Common genetic variants contribute substantially to ADHD suscept...

    Ditte Demontis, Raymond K. Walters, Joanna Martin, Manuel Mattheisen in Nature Genetics (2019)

  13. No Access

    Article

    Imprint of assortative mating on the human genome

    Preference for mates with similar phenotypes; that is, assortative mating, is widely observed in humans15 and has evolutionary consequences68. Under Fisher's classical theory6, assortative mating is predicted t...

    Loic Yengo, Matthew R. Robinson, Matthew C. Keller in Nature Human Behaviour (2018)

  14. No Access

    Article

    Gene discovery and polygenic prediction from a genome-wide association study of educational attainment in 1.1 million individuals

    Here we conducted a large-scale genetic association analysis of educational attainment in a sample of approximately 1.1 million individuals and identify 1,271 independent genome-wide-significant SNPs. For the ...

    James J. Lee, Robbee Wedow, Aysu Okbay, Edward Kong, Omeed Maghzian in Nature Genetics (2018)

  15. No Access

    Article

    Multi-trait analysis of genome-wide association summary statistics using MTAG

    We introduce multi-trait analysis of GWAS (MTAG), a method for joint analysis of summary statistics from genome-wide association studies (GWAS) of different traits, possibly from overlap** samples. We apply ...

    Patrick Turley, Raymond K. Walters, Omeed Maghzian, Aysu Okbay in Nature Genetics (2018)

  16. Article

    Correction: Corrigendum: Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses

    Nat. Genet. 48, 624–633 (2016); published online 18 April 2016; corrected after print 27 June 2016; corrected after print 29 August 2016 In the version of this article initially published, one of the affiliati...

    Aysu Okbay, Bart M L Baselmans, Jan-Emmanuel De Neve, Patrick Turley in Nature Genetics (2016)

  17. Article

    Correction: Corrigendum: Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses

    Nat. Genet. 48, 624–633 (2016); published online 18 April 2016; corrected after print 27 June 2016 In the version of this article initially published, the following co-authors and their affiliations were incor...

    Aysu Okbay, Bart M L Baselmans, Jan-Emmanuel De Neve, Patrick Turley in Nature Genetics (2016)

  18. No Access

    Article

    Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses

    Daniel Benjamin, Meike Bartels, Philipp Koellinger and colleagues report a genome-wide association meta-analysis of subjective well-being, depressive symptoms and neuroticism. The study leverages a large sampl...

    Aysu Okbay, Bart M L Baselmans, Jan-Emmanuel De Neve, Patrick Turley in Nature Genetics (2016)

  19. No Access

    Article

    Genome-wide association study identifies 74 loci associated with educational attainment

    A genome-wide association study in 293,723 individuals identifies 74 genetic variants associated with educational attainment, which, although only explaining a small proportion of the variation in educational ...

    Aysu Okbay, Jonathan P. Beauchamp, Mark Alan Fontana, James J. Lee, Tune H. Pers in Nature (2016)

  20. No Access

    Article

    A Trademark Primer For Biotech

    Patrick Turley, Richard Siluk in Bio/Technology (1994)