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  1. Article

    Open Access

    Map** the functional impact of non-coding regulatory elements in primary T cells through single-cell CRISPR screens

    Drug targets with genetic evidence are expected to increase clinical success by at least twofold. Yet, translating disease-associated genetic variants into functional knowledge remains a fundamental challenge ...

    Celia Alda-Catalinas, **mena Ibarra-Soria, Christina Flouri in Genome Biology (2024)

  2. Article

    Open Access

    Immune disease risk variants regulate gene expression dynamics during CD4+ T cell activation

    During activation, T cells undergo extensive gene expression changes that shape the properties of cells to exert their effector function. Understanding the regulation of this process could help explain how gen...

    Blagoje Soskic, Eddie Cano-Gamez, Deborah J. Smyth, Kirsty Ambridge in Nature Genetics (2022)

  3. Article

    Open Access

    Rare variant analysis in eczema identifies exonic variants in DUSP1, NOTCH4 and SLC9A4

    Previous genome-wide association studies revealed multiple common variants involved in eczema but the role of rare variants remains to be elucidated. Here, we investigate the role of rare variants in eczema su...

    Sarah Grosche, Ingo Marenholz, Jorge Esparza-Gordillo in Nature Communications (2021)

  4. Article

    Trans-ancestry analysis reveals genetic and nongenetic associations with COVID-19 susceptibility and severity

    COVID-19 presents with a wide range of severity, from asymptomatic in some individuals to fatal in others. Based on a study of 1,051,032 23andMe research participants, we report genetic and nongenetic associat...

    Janie F. Shelton, Anjali J. Shastri, Chelsea Ye, Catherine H. Weldon in Nature Genetics (2021)

  5. Article

    Open Access

    Single-cell transcriptomics identifies an effectorness gradient sha** the response of CD4+ T cells to cytokines

    Naïve CD4+ T cells coordinate the immune response by acquiring an effector phenotype in response to cytokines. However, the cytokine responses in memory T cells remain largely understudied. Here we use quantitati...

    Eddie Cano-Gamez, Blagoje Soskic, Theodoros I. Roumeliotis in Nature Communications (2020)

  6. No Access

    Article

    Chromatin activity at GWAS loci identifies T cell states driving complex immune diseases

    Immune-disease-associated variants are enriched in active chromatin regions of T cells and macrophages. However, whether these variants function in specific cell states is unknown. Here we stimulated T cells a...

    Blagoje Soskic, Eddie Cano-Gamez, Deborah J. Smyth, Wendy C. Rowan in Nature Genetics (2019)

  7. No Access

    Article

    Identification of new therapeutic targets for osteoarthritis through genome-wide analyses of UK Biobank data

    Osteoarthritis is the most common musculoskeletal disease and the leading cause of disability globally. Here, we performed a genome-wide association study for osteoarthritis (77,052 cases and 378,169 controls)...

    Ioanna Tachmazidou, Konstantinos Hatzikotoulas, Lorraine Southam in Nature Genetics (2019)

  8. No Access

    Article

    Shared genetic origin of asthma, hay fever and eczema elucidates allergic disease biology

    This large-scale genome-wide association analysis of subjects with asthma, hay fever or eczema provides insights into the shared genetic basis of these allergic diseases. The findings suggest that these diseas...

    Manuel A Ferreira, Judith M Vonk, Hansjörg Baurecht, Ingo Marenholz in Nature Genetics (2017)

  9. Article

    Open Access

    Abstracts from the Food Allergy and Anaphylaxis Meeting 2016

    Guillaume Pouessel, Claire Claverie, Julien Labreuche in Clinical and Translational Allergy (2017)

  10. Article

    Open Access

    4th Pediatric Allergy and Asthma Meeting (PAAM)

    WORKSHOP 4: Challenging clinical scenarios (CS01–CS06)

    S. Tolga Yavuz, Ozan Koc, Ali Gungor, Faysal Gok in Clinical and Translational Allergy (2016)

  11. Article

    Open Access

    Meta-analysis identifies seven susceptibility loci involved in the atopic march

    Eczema often precedes the development of asthma in a disease course called the ‘atopic march’. To unravel the genes underlying this characteristic pattern of allergic disease, we conduct a multi-stage genome-w...

    Ingo Marenholz, Jorge Esparza-Gordillo, Franz Rüschendorf in Nature Communications (2015)

  12. No Access

    Article

    High-density genoty** study identifies four new susceptibility loci for atopic dermatitis

    Andre Franke and colleagues perform an association study of atopic dermatitis based on high-density genoty** using the Immunochip array. They identify four new susceptibility loci for this common inflammator...

    David Ellinghaus, Hansjörg Baurecht, Jorge Esparza-Gordillo in Nature Genetics (2013)

  13. Article

    Open Access

    Multi-locus stepwise regression: a haplotype-based algorithm for finding genetic associations applied to atopic dermatitis

    Genome-wide association studies (GWAS) provide an increasing number of single nucleotide polymorphisms (SNPs) associated with diseases. Our aim is to exploit those closely spaced SNPs in candidate regions for ...

    Sven Knüppel, Jorge Esparza-Gordillo, Ingo Marenholz in BMC Medical Genetics (2012)

  14. No Access

    Article

    A common variant on chromosome 11q13 is associated with atopic dermatitis

    Young-Ae Lee and colleagues report results of a genome-wide association study for atopic dermatitis. They identify a risk locus on chromosome 11q13 in a region previously associated with risk of Crohn's disease.

    Jorge Esparza-Gordillo, Stephan Weidinger, Regina Fölster-Holst in Nature Genetics (2009)

  15. No Access

    Article

    Genetic and environmental factors influencing the human factor H plasma levels

    Factor H is a plasma protein that plays a critical role in the regulation of complement activation in fluid phase and on cellular surfaces. Over the years numerous reports have illustrated the association of f...

    Jorge Esparza-Gordillo, José Manuel Soria, Alfonso Buil, Laura Almasy in Immunogenetics (2004)

  16. No Access

    Article

    Genetic determinants of variation in the plasma levels of the C4b-binding protein (C4BP) in Spanish families

    The C4b-binding protein (C4BP) is a plasma glycoprotein implicated in the homeostasis of the complement and coagulation systems. It is composed of two polypeptides (α and β), which form three plasma oligomers ...

    Jorge Esparza-Gordillo, José Manuel Soria, Alfonso Buil in Immunogenetics (2003)