Skip to main content

and
  1. Article

    Open Access

    Not1 and Not4 inversely determine mRNA solubility that sets the dynamics of co-translational events

    The Ccr4-Not complex is mostly known as the major eukaryotic deadenylase. However, several studies have uncovered roles of the complex, in particular of the Not subunits, unrelated to deadenylation and relevan...

    George Allen, Benjamin Weiss, Olesya O. Panasenko, Susanne Huch in Genome Biology (2023)

  2. Article

    Open Access

    GPR68 limits the severity of chemical-induced oral epithelial dysplasia

    Head and neck cancer is the sixth most common malignancy, and there is an urgent need to identify physiological processes contributing to tumorigenesis. Extracellular acidification caused by aerobic glycolysis...

    David Shore, Nosakhere Griggs, Vincent Graffeo, A. R. M. Ruhul Amin in Scientific Reports (2023)

  3. No Access

    Chapter

    Empyema Thoracis

    Empyema thoracis, from the Greek, is defined simply as “pus in the pleural cavity.” Causes are multifactorial, although the majority results from bacterial pneumonia with subsequent parapneumonic effusion. Wit...

    David Shore, Jennifer W. Toth in Interventions in Pulmonary Medicine (2023)

  4. Article

    Open Access

    Pitfalls in using phenanthroline to study the causal relationship between promoter nucleosome acetylation and transcription

    Sevil Zencir, Daniel Dilg, David Shore, Benjamin Albert in Nature Communications (2022)

  5. No Access

    Article

    Opposing chromatin remodelers control transcription initiation frequency and start site selection

    Precise nucleosome organization at eukaryotic promoters is thought to be generated by multiple chromatin remodeler (CR) enzymes and to affect transcription initiation. Using an integrated analysis of chromatin...

    Slawomir Kubik, Maria Jessica Bruzzone in Nature Structural & Molecular Biology (2019)

  6. Article

    Open Access

    Rif1 S-acylation mediates DNA double-strand break repair at the inner nuclear membrane

    Rif1 is involved in telomere homeostasis, DNA replication timing, and DNA double-strand break (DSB) repair pathway choice from yeast to human. The molecular mechanisms that enable Rif1 to fulfill its diverse r...

    Gabriele A. Fontana, Daniel Hess, Julia K. Reinert in Nature Communications (2019)

  7. No Access

    Article

    ChECing out Rif1 action in freely cycling cells

    In buddying yeast, like all eukaryotes examined so far, DNA replication is under temporal control, such that some origins fire early and some late during S phase. This replication timing program is established...

    Lukas Hafner, David Shore, Stefano Mattarocci in Current Genetics (2019)

  8. No Access

    Article

    Rif1 maintains telomeres and mediates DNA repair by encasing DNA ends

    Structure determination and functional analyses of budding yeast Rif1 reveal a novel, hooked N-terminal DNA-binding domain required for telomere maintenance and checkpoint control and show that Rif1's role in ...

    Stefano Mattarocci, Julia K Reinert in Nature Structural & Molecular Biology (2017)

  9. Article

    Open Access

    A potent broad-spectrum protective human monoclonal antibody crosslinking two haemagglutinin monomers of influenza A virus

    Effective annual influenza vaccination requires frequent changes in vaccine composition due to both antigenic shift for different subtype hemagglutinins (HAs) and antigenic drift in a particular HA. Here we pr...

    Ying Wu, MyungSam Cho, David Shore, Manki Song, JungAh Choi in Nature Communications (2015)

  10. No Access

    Article

    Regulation of telomere addition at DNA double-strand breaks

    Telomeres constitute the ends of linear eukaryotic chromosomes. Due to the conventional mode of DNA replication, telomeric DNA erodes at each cell division. To counteract this, a specialized reverse transcript...

    Cyril Ribeyre, David Shore in Chromosoma (2013)

  11. Article

    Open Access

    Global control of DNA replication timing by the budding yeast telomere protein Rif1

    Laure Lemmens, Stefano Mattarocci, Isabella Marcomini in Epigenetics & Chromatin (2013)

  12. No Access

    Article

    Anticheckpoint pathways at telomeres in yeast

    How yeast telomeres avoid triggering DNA damage checkpoints is studied by creating de novo telomere ends with different amounts of telomeric repeats. Rif1 and Rif2 protect short telomere tracts through different ...

    Cyril Ribeyre, David Shore in Nature Structural & Molecular Biology (2012)

  13. No Access

    Article

    A conserved motif within RAP1 has diversified roles in telomere protection and regulation in different organisms

    Telomere protein RAP1 is found in organisms from yeast to mammals, but has different functions. Now the crystal structures of the RAP1 C-terminus (RCT) with its different interacting partners, together with fu...

    Yong Chen, Rekha Rai, Zi-Ren Zhou, Junko Kanoh in Nature Structural & Molecular Biology (2011)

  14. No Access

    Chapter

    Human Subject Protection and Special Population Issues

    Understanding the principles and processes for protecting human subject (HS) safety is paramount in successfully carrying out clinical research. This chapter outlines the obligations that you have to HS protec...

    Christine Moretto Wishnoff in How to Write a Successful Research Grant A… (2011)

  15. No Access

    Article

    Growth-regulated recruitment of the essential yeast ribosomal protein gene activator Ifh1

    Regulation of ribosome biogenesis is central to the control of cell growth1. In rapidly growing yeast cells, ribosomal protein (RP) genes account for approximately one-half of all polymerase II transcription-init...

    Stephan B. Schawalder, Mehdi Kabani, Isabelle Howald, Urmila Choudhury in Nature (2004)

  16. No Access

    Article

    Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast

    Eukaryotic genomes are packaged into nucleosomes, which are thought to repress gene expression generally1,2,3. Repression is particularly evident at yeast telomeres, where genes within the telomeric heterochromat...

    John J. Wyrick, Frank C. P. Holstege, Ezra G. Jennings, Helen C. Causton in Nature (1999)

  17. No Access

    Article

    Different means to common ends

    David Shore in Nature (1997)

  18. No Access

    Article

    The means to bind the ends

    The structure of a protein–telomere DNA complex from the yeast Saccharamyces cerevisiae suggests a highly conserved mode of telomere recognition.

    David Shore in Nature Structural Biology (1996)