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Chapter
Engineering Herbicide Resistance Pathways in Plastids
Herbicides are an integral part of modern day agriculture as they facilitate efficient crop management. Most of the herbicides target specific enzymes involved in metabolic pathways that are vital for plant gr...
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Article
Open AccessASAP: Amplification, sequencing & annotation of plastomes
Availability of DNA sequence information is vital for pursuing structural, functional and comparative genomics studies in plastids. Traditionally, the first step in mining the valuable information within a chl...
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Article
Invited review: Transformation of strawberry: The basis for translational genomics in Rosaceae
Translational genomics is defined as the application of molecular-genetic principles derived from model systems to species of experimental or economic interest. The past 20 years of research in plant model sys...
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Chapter
Rosaceaous Genome Sequencing: Perspectives and Progress
The long-term goal of plant genomics is to identify, isolate and determine the function of plant genes that are associated with both vegetative and reproductive phenotypes. Most phenotypes require the coordina...
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Article
Open AccessWhole genome sequencing of peach (Prunus persica L.) for SNP identification and selection
The application of next generation sequencing technologies and bioinformatic scripts to identify high frequency SNPs distributed throughout the peach genome is described. Three peach genomes were sequenced usi...
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Article
Open AccessRapid gene-based SNP and haplotype marker development in non-model eukaryotes using 3'UTR sequencing
Sweet cherry (Prunus avium L.), a non-model crop with narrow genetic diversity, is an important member of sub-family Amygdoloideae within Rosaceae. Compared to other important members like peach and apple, sweet ...
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Article
Effect of phyllotactic position and cultural treatments toward successful direct shoot organogenesis in dwarf ‘Pixie’ grapevine (Vitis vinifera L.)
In Vitis spp. where somatic embryogenesis-based regeneration predominates, an efficient, reproducible and robust method of direct shoot organogenesis from leaf explant material has been established in the dwarf w...
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Article
Antisense expression of peach mildew resistance locus O (PpMlo1) gene confers cross-species resistance to powdery mildew in Fragaria x ananassa
Powdery mildew (PM) is one of the major plant pathogens. The conventional method of PM control includes frequent use of sulfur-based fungicides adding to production costs and potential harm to the environment....
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Article
Evaluation of pea accessions and commercial cultivars for fusarium root rot resistance
Fusarium root rot caused by Fusarium solani f. sp. pisi (Fsp) can result in major yield losses in pea (Pisum sativum L.). Currently no fungicides effectively manage this disease. Previous studies evaluated the Pi...
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Article
Open AccessDevelopment of a highly efficient Axiom™ 70 K SNP array for Pyrus and evaluation for high-density map** and germplasm characterization
Both a source of diversity and the development of genomic tools, such as reference genomes and molecular markers, are equally important to enable faster progress in plant breeding. Pear (Pyrus spp.) lags far behi...
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Article
CRISPR-associated nucleases: the Dawn of a new age of efficient crop improvement
The world stands at a new threshold today. As a planet, we face various challenges, and the key one is how to continue to produce enough food, feed, fiber, and fuel to support the burgeoning population. In the...
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Article
Preface: Genome editing in plants
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Article
Genome editing in fruit, ornamental, and industrial crops
The advent of genome editing has opened new avenues for targeted trait enhancement in fruit, ornamental, industrial, and all specialty crops. In particular, CRISPR-based editing systems, derived from bacterial...
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Article
Genome editing reagent delivery in plants
Genome editing holds the potential for rapid crop improvement to meet the challenge of feeding the planet in a changing climate. The delivery of gene editing reagents into the plant cells has been dominated by...