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  1. No Access

    Chapter

    Engineering Herbicide Resistance Pathways in Plastids

    Herbicides are an integral part of modern day agriculture as they facilitate efficient crop management. Most of the herbicides target specific enzymes involved in metabolic pathways that are vital for plant gr...

    Amit Dhingra, Dr. Henry Daniell in Molecular Biology and Biotechnology of Plant Organelles (2004)

  2. Article

    Open Access

    ASAP: Amplification, sequencing & annotation of plastomes

    Availability of DNA sequence information is vital for pursuing structural, functional and comparative genomics studies in plastids. Traditionally, the first step in mining the valuable information within a chl...

    Amit Dhingra, Kevin M Folta in BMC Genomics (2005)

  3. No Access

    Article

    Invited review: Transformation of strawberry: The basis for translational genomics in Rosaceae

    Translational genomics is defined as the application of molecular-genetic principles derived from model systems to species of experimental or economic interest. The past 20 years of research in plant model sys...

    Kevin M. Folta, Amit Dhingra in In Vitro Cellular & Developmental Biology - Plant (2006)

  4. No Access

    Chapter

    Rosaceaous Genome Sequencing: Perspectives and Progress

    The long-term goal of plant genomics is to identify, isolate and determine the function of plant genes that are associated with both vegetative and reproductive phenotypes. Most phenotypes require the coordina...

    Bryon Sosinski, Vladimir Shulaev, Amit Dhingra in Genetics and Genomics of Rosaceae (2009)

  5. Article

    Open Access

    Whole genome sequencing of peach (Prunus persica L.) for SNP identification and selection

    The application of next generation sequencing technologies and bioinformatic scripts to identify high frequency SNPs distributed throughout the peach genome is described. Three peach genomes were sequenced usi...

    Riaz Ahmad, Dan E Parfitt, Joseph Fass, Ebenezer Ogundiwin, Amit Dhingra in BMC Genomics (2011)

  6. Article

    Open Access

    Rapid gene-based SNP and haplotype marker development in non-model eukaryotes using 3'UTR sequencing

    Sweet cherry (Prunus avium L.), a non-model crop with narrow genetic diversity, is an important member of sub-family Amygdoloideae within Rosaceae. Compared to other important members like peach and apple, sweet ...

    Tyson Koepke, Scott Schaeffer, Vandhana Krishnan, Derick Jiwan in BMC Genomics (2012)

  7. No Access

    Article

    Effect of phyllotactic position and cultural treatments toward successful direct shoot organogenesis in dwarf ‘Pixie’ grapevine (Vitis vinifera L.)

    In Vitis spp. where somatic embryogenesis-based regeneration predominates, an efficient, reproducible and robust method of direct shoot organogenesis from leaf explant material has been established in the dwarf w...

    Kathie L. Nicholson, Nathan Tarlyn in Plant Cell, Tissue and Organ Culture (PCTO… (2012)

  8. No Access

    Article

    Antisense expression of peach mildew resistance locus O (PpMlo1) gene confers cross-species resistance to powdery mildew in Fragaria x ananassa

    Powdery mildew (PM) is one of the major plant pathogens. The conventional method of PM control includes frequent use of sulfur-based fungicides adding to production costs and potential harm to the environment....

    Derick Jiwan, Eric H. Roalson, Dorrie Main, Amit Dhingra in Transgenic Research (2013)

  9. No Access

    Article

    Evaluation of pea accessions and commercial cultivars for fusarium root rot resistance

    Fusarium root rot caused by Fusarium solani f. sp. pisi (Fsp) can result in major yield losses in pea (Pisum sativum L.). Currently no fungicides effectively manage this disease. Previous studies evaluated the Pi...

    Eliane T. Bodah, Lyndon D. Porter, Bernardo Chaves, Amit Dhingra in Euphytica (2016)

  10. Article

    Open Access

    Development of a highly efficient Axiom™ 70 K SNP array for Pyrus and evaluation for high-density map** and germplasm characterization

    Both a source of diversity and the development of genomic tools, such as reference genomes and molecular markers, are equally important to enable faster progress in plant breeding. Pear (Pyrus spp.) lags far behi...

    Sara Montanari, Luca Bianco, Brian J. Allen, Pedro J. Martínez-García in BMC Genomics (2019)

  11. No Access

    Article

    CRISPR-associated nucleases: the Dawn of a new age of efficient crop improvement

    The world stands at a new threshold today. As a planet, we face various challenges, and the key one is how to continue to produce enough food, feed, fiber, and fuel to support the burgeoning population. In the...

    Rishikesh Ghogare, Bruce Williamson-Benavides in Transgenic Research (2020)

  12. Article

    Preface: Genome editing in plants

    Paul Christou, Amit Dhingra, Inez H. Slamet-Loedin in Transgenic Research (2021)

  13. No Access

    Article

    Genome editing in fruit, ornamental, and industrial crops

    The advent of genome editing has opened new avenues for targeted trait enhancement in fruit, ornamental, industrial, and all specialty crops. In particular, CRISPR-based editing systems, derived from bacterial...

    Fabiola Ramirez-Torres, Rishikesh Ghogare, Evan Stowe in Transgenic Research (2021)

  14. No Access

    Article

    Genome editing reagent delivery in plants

    Genome editing holds the potential for rapid crop improvement to meet the challenge of feeding the planet in a changing climate. The delivery of gene editing reagents into the plant cells has been dominated by...

    Rishikesh Ghogare, Yvonne Ludwig, Gela Myan Bueno in Transgenic Research (2021)