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  1. Article

    Open Access

    V-Phaser 2: variant inference for viral populations

    Massively parallel sequencing offers the possibility of revolutionizing the study of viral populations by providing ultra deep sequencing (tens to hundreds of thousand fold coverage) of complete viral genomes....

    **ao Yang, Patrick Charlebois, Alex Macalalad, Matthew R Henn in BMC Genomics (2013)

  2. Article

    Sensitive population profiling and genome assembly of HIV and Flaviviruses using ultra-deep sequencing technologies

    Matthew R Henn, Niall J Lennon, Ruchi Newman, Patrick Charlebois in Genome Biology (2010)