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Article
Argonaute HITS-CLIP decodes microRNA–mRNA interaction maps
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major chal...
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Article
HITS-CLIP yields genome-wide insights into brain alternative RNA processing
Protein–RNA interactions have critical roles in all aspects of gene expression. However, applying biochemical methods to understand such interactions in living tissues has been challenging. Here we develop a g...
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Article
An RNA map predicting Nova-dependent splicing regulation
Nova proteins are neuron-specific alternative splicing factors. We have combined bioinformatics, biochemistry and genetics to derive an RNA map describing the rules by which Nova proteins regulate alternative ...