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  1. Article

    Open Access

    Targeted mutagenesis of the herpesvirus fusogen central helix captures transition states

    Herpesviruses remain a burden for animal and human health, including the medically important varicella-zoster virus (VZV). Membrane fusion mediated by conserved core glycoproteins, the fusogen gB and the heter...

    Momei Zhou, Benjamin Vollmer, Emily Machala, Muyuan Chen in Nature Communications (2023)

  2. Article

    Open Access

    Structural insights into the modulation of coronavirus spike tilting and infectivity by hinge glycans

    Coronavirus spike glycoproteins presented on the virion surface mediate receptor binding, and membrane fusion during virus entry and constitute the primary target for vaccine and drug development. How the stru...

    David Chmielewski, Eric A. Wilson, Grigore Pintilie, Peng Zhao in Nature Communications (2023)

  3. Article

    Open Access

    Previously uncharacterized rectangular bacterial structures in the dolphin mouth

    Much remains to be explored regarding the diversity of uncultured, host-associated microbes. Here, we describe rectangular bacterial structures (RBSs) in the mouths of bottlenose dolphins. DNA staining reveale...

    Natasha K. Dudek, Jesus G. Galaz-Montoya, Handuo Shi, Megan Mayer in Nature Communications (2023)

  4. Article

    Open Access

    CryoET reveals organelle phenotypes in huntington disease patient iPSC-derived and mouse primary neurons

    Huntington’s disease (HD) is caused by an expanded CAG repeat in the huntingtin gene, yielding a Huntingtin protein with an expanded polyglutamine tract. While experiments with patient-derived induced pluripot...

    Gong-Her Wu, Charlene Smith-Geater, Jesús G. Galaz-Montoya in Nature Communications (2023)

  5. Article

    Open Access

    3D RNA-scaffolded wireframe origami

    Hybrid RNA:DNA origami, in which a long RNA scaffold strand folds into a target nanostructure via thermal annealing with complementary DNA oligos, has only been explored to a limited extent despite its unique ...

    Molly F. Parsons, Matthew F. Allan, Shanshan Li, Tyson R. Shepherd in Nature Communications (2023)

  6. Article

    Open Access

    CryoEM reveals the stochastic nature of individual ATP binding events in a group II chaperonin

    Chaperonins are homo- or hetero-oligomeric complexes that use ATP binding and hydrolysis to facilitate protein folding. ATP hydrolysis exhibits both positive and negative cooperativity. The mechanism by which ...

    Yanyan Zhao, Michael F. Schmid, Judith Frydman, Wah Chiu in Nature Communications (2021)

  7. No Access

    Article

    Cryo-EM structures of full-length Tetrahymena ribozyme at 3.1 Å resolution

    Single-particle cryogenic electron microscopy (cryo-EM) has become a standard technique for determining protein structures at atomic resolution13. However, cryo-EM studies of protein-free RNA are in their early ...

    Zhaoming Su, Kaiming Zhang, Kalli Kappel, Shanshan Li, Michael Z. Palo in Nature (2021)

  8. Article

    Open Access

    Publisher Correction: A glycoprotein B-neutralizing antibody structure at 2.8 Å uncovers a critical domain for herpesvirus fusion initiation

    An amendment to this paper has been published and can be accessed via a link at the top of the paper.

    Stefan L. Oliver, Yi **ng, Dong-Hua Chen, Soung Hun Roh in Nature Communications (2020)

  9. Article

    Open Access

    A glycoprotein B-neutralizing antibody structure at 2.8 Å uncovers a critical domain for herpesvirus fusion initiation

    Members of the Herpesviridae, including the medically important alphaherpesvirus varicella-zoster virus (VZV), induce fusion of the virion envelope with cell membranes during entry, and between cells to form poly...

    Stefan L. Oliver, Yi **ng, Dong-Hua Chen, Soung Hun Roh in Nature Communications (2020)

  10. Article

    Open Access

    Structure of the G protein chaperone and guanine nucleotide exchange factor Ric-8A bound to Gαi1

    Ric-8A is a cytosolic Guanine Nucleotide exchange Factor (GEF) that activates heterotrimeric G protein alpha subunits (Gα) and serves as an essential Gα chaperone. Mechanisms by which Ric-8A catalyzes these ac...

    Levi J. McClelland, Kaiming Zhang, Tung-Chung Mou, Jake Johnston in Nature Communications (2020)

  11. Article

    Open Access

    Ultra-thermostable RNA nanoparticles for solubilizing and high-yield loading of paclitaxel for breast cancer therapy

    Paclitaxel is widely used in cancer treatments, but poor water-solubility and toxicity raise serious concerns. Here we report an RNA four-way junction nanoparticle with ultra-thermodynamic stability to solubil...

    Si** Guo, Mario Vieweger, Kaiming Zhang, Hongran Yin in Nature Communications (2020)

  12. Article

    Open Access

    TrkA undergoes a tetramer-to-dimer conversion to open TrkH which enables changes in membrane potential

    TrkH is a bacterial ion channel implicated in K+ uptake and pH regulation. TrkH assembles with its regulatory protein, TrkA, which closes the channel when bound to ADP and opens it when bound to ATP. However, it ...

    Hanzhi Zhang, Ya** Pan, Liya Hu, M. Ashley Hudson in Nature Communications (2020)

  13. Article

    Open Access

    Cryo-EM structure of a 40 kDa SAM-IV riboswitch RNA at 3.7 Å resolution

    Specimens below 50 kDa have generally been considered too small to be analyzed by single-particle cryo-electron microscopy (cryo-EM). The high flexibility of pure RNAs makes it difficult to obtain high-resolut...

    Kaiming Zhang, Shanshan Li, Kalli Kappel, Grigore Pintilie in Nature Communications (2019)

  14. Article

    Open Access

    Programming molecular topologies from single-stranded nucleic acids

    Molecular knots represent one of the most extraordinary topological structures in biological polymers. Creating highly knotted nanostructures with well-defined and sophisticated geometries and topologies remai...

    **aodong Qi, Fei Zhang, Zhaoming Su, Shuoxing Jiang, Dongran Han in Nature Communications (2018)

  15. Article

    Open Access

    GENFIRE: A generalized Fourier iterative reconstruction algorithm for high-resolution 3D imaging

    Tomography has made a radical impact on diverse fields ranging from the study of 3D atomic arrangements in matter to the study of human health in medicine. Despite its very diverse applications, the core of to...

    Alan Pryor Jr., Yongsoo Yang, Arjun Rana, Marcus Gallagher-Jones in Scientific Reports (2017)

  16. Article

    Open Access

    Visualizing Adsorption of Cyanophage P-SSP7 onto Marine Prochlorococcus

    Marine cyanobacteria perform roughly a quarter of global carbon fixation, and cyanophages that infect them liberate some of this carbon during infection and cell lysis. Studies of the cyanobacterium Prochlorococc...

    Kazuyoshi Murata, Qinfen Zhang, Jesús Gerardo Galaz-Montoya in Scientific Reports (2017)

  17. No Access

    Article

    Gating machinery of InsP3R channels revealed by electron cryomicroscopy

    Inositol-1,4,5-trisphosphate receptors (InsP3Rs) are ubiquitous ion channels responsible for cytosolic Ca2+ signalling and essential for a broad array of cellular processes ranging from contraction to secretion, ...

    Guizhen Fan, Matthew L. Baker, Zhao Wang, Mariah R. Baker, Pavel A. Sinyagovskiy in Nature (2015)

  18. Article

    Open Access

    Erratum: Structural diversity of supercoiled DNA

    Nature Communications, 6: Article number: 8440 (2015); Published: 12 October 2015; Updated: 29 October 2015 The original version of this Article contained an error in the spelling of the author Daniel J. Catan...

    Rossitza N. Irobalieva, Jonathan M. Fogg, Daniel J. Catanese Jr in Nature Communications (2015)

  19. Article

    Open Access

    Structural diversity of supercoiled DNA

    By regulating access to the genetic code, DNA supercoiling strongly affects DNA metabolism. Despite its importance, however, much about supercoiled DNA (positively supercoiled DNA, in particular) remains unkno...

    Rossitza N. Irobalieva, Jonathan M. Fogg, Daniel J. Catanese Jr in Nature Communications (2015)

  20. Article

    Correction: Corrigendum: Protruding knob-like proteins violate local symmetries in an icosahedral marine virus

    Nature Communications 5: Article number: 4278 (2014); Published: 2 July 2014; Updated: 12 January 2015. The Protein Data Bank accession code provided in this Article is incorrect; the correct code is 4bml.

    Preeti Gipson, Matthew L. Baker, Desislava Raytcheva in Nature Communications (2015)

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