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    Article

    Diverse Community Structures in the Neuronal-Level Connectome of the Drosophila Brain

    Drosophila melanogaster is one of the most important model animals in neurobiology owing to its manageable brain size, complex behaviour, and extensive genetic tools. However, without a comprehensive map of the b...

    Chi-Tin Shih, Yen-Jen Lin, Cheng-Te Wang, Ting-Yuan Wang in Neuroinformatics (2020)

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    Article

    Kaleido: Visualizing Big Brain Data with Automatic Color Assignment for Single-Neuron Images

    Effective 3D visualization is essential for connectomics analysis, where the number of neural images easily reaches over tens of thousands. A formidable challenge is to simultaneously visualize a large number ...

    Ting-Yuan Wang, Nan-Yow Chen, Guan-Wei He, Guo-Tzau Wang, Chi-Tin Shih in Neuroinformatics (2018)

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    Article

    Soma Detection in 3D Images of Neurons using Machine Learning Technique

    Computing and analyzing the neuronal structure is essential to studying connectome. Two important tasks for such analysis are finding the soma and constructing the neuronal structure. Finding the soma is consi...

    Guan-Wei He, Ting-Yuan Wang, Ann-Shyn Chiang, Yu-Tai Ching in Neuroinformatics (2018)

  4. Article

    Open Access

    Large-scale quantitative analysis of neurons via morphological structures by Fast Automatically Structural Tracing Algorithm (FAST)

    Nan-Yow Chen, Kuan-Peng Chen, Chi-Tin Shih, Guan-Wei He, Ting-Yuan Wang in BMC Neuroscience (2015)

  5. Article

    Open Access

    Large-scale segmentation and tracing for neurons in Drosophila brain by Fast Automatically Structural Tracing Algorithm (FASTA)

    Nan-Yow Chen, Meng-Fu Maxwell Shih, Chi-Tin Shih, Guan-Wei He in BMC Neuroscience (2013)

  6. Article

    Open Access

    A comprehensive resource for integrating and displaying protein post-translational modifications

    Protein Post-Translational Modification (PTM) plays an essential role in cellular control mechanisms that adjust protein physical and chemical properties, folding, conformation, stability and activity, thus al...

    Tzong-Yi Lee, Justin Bo-Kai Hsu, Wen-Chi Chang, Ting-Yuan Wang in BMC Research Notes (2009)