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  1. Article

    Open Access

    Deep behavioural phenoty** of the Q175 Huntington disease mouse model: effects of age, sex, and weight

    Huntington disease (HD) is a neurodegenerative disorder with complex motor and behavioural manifestations. The Q175 knock-in mouse model of HD has gained recent popularity as a genetically accurate model of th...

    Ellen T. Koch, Judy Cheng, Daniel Ramandi, Marja D. Sepers, Alex Hsu in BMC Biology (2024)

  2. Article

    Open Access

    MesoNet allows automated scaling and segmentation of mouse mesoscale cortical maps using machine learning

    Understanding the basis of brain function requires knowledge of cortical operations over wide spatial scales and the quantitative analysis of brain activity in well-defined brain regions. Matching an anatomica...

    Dongsheng **ao, Brandon J. Forys, Matthieu P. Vanni in Nature Communications (2021)

  3. No Access

    Article

    A three-dimensional virtual mouse generates synthetic training data for behavioral analysis

    We developed a three-dimensional (3D) synthetic animated mouse based on computed tomography scans that is actuated using animation and semirandom, joint-constrained movements to generate synthetic behavioral d...

    Luis A. Bolaños, Dongsheng **ao, Nancy L. Ford, Jeff M. LeDue in Nature Methods (2021)

  4. Article

    Open Access

    PiDose: an open-source system for accurate and automated oral drug administration to group-housed mice

    Drug treatment studies in laboratory mice typically employ manual administration methods such as injection or gavage, which can be time-consuming to perform over long periods and cause substantial stress in an...

    Cameron L. Woodard, Wissam B. Nasrallah, Bahram V. Samiei in Scientific Reports (2020)

  5. Article

    Open Access

    Stress impacts sensory variability through cortical sensory activity motifs

    Medically unexplained symptoms in depression are common. These individual-specific complaints are often considered an ‘idiom of distress’, yet animal studies suggest that cortical sensory representations are f...

    Alexander McGirr, Jeffrey LeDue, Allen W. Chan, James D. Boyd in Translational Psychiatry (2020)

  6. Article

    Open Access

    Peripheral Nerve Ligation Elicits Widespread Alterations in Cortical Sensory Evoked and Spontaneous Activity

    Peripheral neuropathies result in adaptation in primary sensory and other regions of cortex, and provide a framework for understanding the localized and widespread adaptations that arise from altered sensation...

    Donovan M. Ashby, Jeffrey LeDue, Timothy H. Murphy, Alexander McGirr in Scientific Reports (2019)

  7. Article

    Open Access

    High-throughput automated home-cage mesoscopic functional imaging of mouse cortex

    Mouse head-fixed behaviour coupled with functional imaging has become a powerful technique in rodent systems neuroscience. However, training mice can be time consuming and is potentially stressful for animals....

    Timothy H. Murphy, Jamie D. Boyd, Federico Bolaños in Nature Communications (2016)

  8. Article

    Open Access

    Real-time imaging of glutamate clearance reveals normal striatal uptake in Huntington disease mouse models

    It has become well accepted that Huntington disease (HD) is associated with impaired glutamate uptake, resulting in a prolonged time-course of extracellular glutamate that contributes to excitotoxicity. Howeve...

    Matthew P. Parsons, Matthieu P. Vanni, Cameron L. Woodard in Nature Communications (2016)

  9. No Access

    Article

    Mesoscale infraslow spontaneous membrane potential fluctuations recapitulate high-frequency activity cortical motifs

    Neuroimaging of spontaneous, resting-state infraslow (<0.1 Hz) brain activity has been used to reveal the regional functional organization of the brain and may lead to the identification of novel biomarkers of...

    Allen W. Chan, Majid H. Mohajerani, Jeffrey M. LeDue, Yu Tian Wang in Nature Communications (2015)

  10. Article

    Open Access

    A dynamic model for delta rhythm fit to high-frequency cortical activity data shows discrete functional connectivity in mouse cortex

    Mark A Reimers, Majid Mohajerani, Timothy H Murphy in BMC Neuroscience (2014)

  11. No Access

    Article

    Spontaneous cortical activity alternates between motifs defined by regional axonal projections

    Using voltage sensitive–dye imaging in the cortices of anesthetized and awake mice, the authors show that spontaneous activity patterns contain similar motifs as those evoked by sensory stimulation. These moti...

    Majid H Mohajerani, Allen W Chan, Mostafa Mohsenvand, Jeffrey LeDue in Nature Neuroscience (2013)

  12. Article

    Open Access

    A model for delta rhythm fit to high-frequency cortical activity data

    Mark Reimers, Majid Mohajerani, Timothy H Murphy in BMC Neuroscience (2013)

  13. No Access

    Article

    Plasticity during stroke recovery: from synapse to behaviour

  14. Reductions in blood flow to the brain of sufficient duration and extent lead to stroke, which results in damage to neuronal networks and impairment of sensatio...

  15. Timothy H. Murphy, Dale Corbett in Nature Reviews Neuroscience (2009)

  16. No Access

    Article

    Automated light-based map** of motor cortex by photoactivation of channelrhodopsin-2 transgenic mice

    Optical stimulation of channelrhodopsin-2 expressed in neurons of the motor cortex is combined with electromyogram recordings or motion-sensing of limb muscles to achieve fast motor map** in the mouse.

    Oliver G S Ayling, Thomas C Harrison, Jamie D Boyd, Alexander Goroshkov in Nature Methods (2009)

  17. No Access

    Article

    Activity-dependent synapse development: changing the rules

    In a recent Nature paper, reduction of postsynaptic activity within single neurons of an active network reveals a new role for Hebbian competition during early development.

    Timothy H. Murphy in Nature Neuroscience (2003)

  18. No Access

    Article

    Differential regulation of synaptic and extra-synaptic NMDA receptors

    A variety of processes limit NMDA (N-methyl-D-aspartate) receptor (NMDAR) activity in response to agonist exposure, including rundown—the decline of peak current with repeated, sustained agonist application1,2,3,

    Bo Li, Nansheng Chen, Tao Luo, Yo Otsu, Timothy H. Murphy in Nature Neuroscience (2002)

  19. No Access

    Article

    P/Q-type calcium channels mediate the activity-dependent feedback of syntaxin-1A

    Spatial and temporal changes in intracellular calcium concentrations are critical for controlling gene expression in neurons1,2,3,4,5. In many neurons, activity-dependent calcium influx through L-type channels st...

    Kathy G. Sutton, John E. McRory, Heather Guthrie, Timothy H. Murphy in Nature (1999)

  20. No Access

    Chapter and Conference Paper

    Phosphoinositide-Linked Glutamate Receptors: Prominent Actions in Neurons and Glia

    Recent studies have identified a novel glutamate receptor subtype that is coupled to activation of the phosphoinositide (PI) cycle [1–6]. To help identify the role of this receptor in mediating effects of exci...

    Jay M. Baraban, Timothy H. Murphy in Excitatory Amino Acids and Second Messenge… (1991)