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  1. Article

    Author Correction: Julia for biologists

    Elisabeth Roesch, Joe G. Greener, Adam L. MacLean, Huda Nassar in Nature Methods (2023)

  2. Article

    Julia for biologists

    Major computational challenges exist in relation to the collection, curation, processing and analysis of large genomic and imaging datasets, as well as the simulation of larger and more realistic models in sys...

    Elisabeth Roesch, Joe G. Greener, Adam L. MacLean, Huda Nassar in Nature Methods (2023)

  3. Article

    Open Access

    Fast objective coupled planar illumination microscopy

    Among optical imaging techniques light sheet fluorescence microscopy is one of the most attractive for capturing high-speed biological dynamics unfolding in three dimensions. The technique is potentially milli...

    Cody J. Greer, Timothy E. Holy in Nature Communications (2019)

  4. Article

    Publisher Correction: Sensory experience remodels genome architecture in neural circuit to drive motor learning

    In this Letter, ‘≥’ should be ‘≤’ in the sentence: “Intra-chromosomal reads were further split into short-range reads (≥1 kb) and long-range reads (>1 kb)”. This error has been corrected online.

    Tomoko Yamada, Yue Yang, Pamela Valnegri, Ivan Juric, Armen Abnousi in Nature (2019)

  5. No Access

    Article

    Sensory experience remodels genome architecture in neural circuit to drive motor learning

    Neuronal-activity-dependent transcription couples sensory experience to adaptive responses of the brain including learning and memory. Mechanisms of activity-dependent gene expression including alterations of ...

    Tomoko Yamada, Yue Yang, Pamela Valnegri, Ivan Juric, Armen Abnousi in Nature (2019)

  6. No Access

    Article

    Olfactory bulb connectomics: a silver lining

    In high-throughput electron microscopy, a simple method to reduce artifacts helps reveal the architecture of circuits in the develo** zebrafish olfactory bulb.

    Timothy E Holy in Nature Neuroscience (2016)

  7. No Access

    Article

    Scenting Waldo: analyzing olfactory scenes

    Olfaction has often been described as a 'synthetic' sense. A study now reveals a surprising capacity to resolve individual odorants in complex mixtures, with implications for how the nervous system recognizes ...

    Timothy E Holy in Nature Neuroscience (2014)

  8. No Access

    Article

    High-Energy Collision-Induced Dissociation by MALDI TOF/TOF Causes Charge-Remote Fragmentation of Steroid Sulfates

    A method for structural elucidation of biomolecules dating to the 1980s utilized high-energy collisions (~10 keV, laboratory frame) that induced charge-remote fragmentations (CRF), a class of fragmentations pa...

    Yuetian Yan, Masaaki Ubukata, Robert B. Cody in Journal of The American Society for Mass S… (2014)

  9. No Access

    Article

    Functional organization of glomerular maps in the mouse accessory olfactory bulb

    Unlike that of its main counterpart, the functional organization of the accessory olfactory bulb, important for detecting socially relevant odors, remains to be detailed. Here the authors map out Ca2+ signals fro...

    Gary F Hammen, Diwakar Turaga, Timothy E Holy, Julian P Meeks in Nature Neuroscience (2014)

  10. No Access

    Article

    Mass Spectrometry Combinations for Structural Characterization of Sulfated-Steroid Metabolites

    Steroid conjugates, which often occur as metabolites, are challenging to characterize. One application is female-mouse urine, where steroid conjugates serve as important ligands for the pheromone-sensing neuro...

    Yuetian Yan, Don L. Rempel, Timothy E. Holy in Journal of The American Society for Mass S… (2014)

  11. No Access

    Protocol

    Whole-Mount Imaging of Responses in Mouse Vomeronasal Neurons

    Imaging permits the visualization of neural activity from the whole-mount vomeronasal sensory epithelium with single-cell resolution. The preparation preserves an intact tissue environment, enabling the robust...

    Pei Sabrina Xu, Timothy E. Holy in Pheromone Signaling (2013)

  12. No Access

    Protocol

    Electrical Recordings from the Accessory Olfactory Bulb in VNO-AOB Ex Vivo Preparations

    Electrical recordings from individual accessory olfactory bulb neurons allow exploration of the functional properties of this important pheromonal processing circuit. Several approaches to performing such reco...

    Julian P. Meeks, Timothy E. Holy in Pheromone Signaling (2013)

  13. No Access

    Article

    Reward alters specific connections

    How does the brain couple a fleeting sensory input to a delayed reward during learning? A study in locusts shows that coincident firing of neurons can 'mark' a neuronal connection for later modulation. See Articl...

    Timothy E. Holy in Nature (2012)

  14. No Access

    Article

    “Yes! We're all individuals!”: redundancy in neuronal circuits

    In the mouse olfactory bulb, cells with common input respond to odors with similar firing rates but with different timing. This suggests that such 'sister' cells make independent and unique connections with lo...

    Timothy E Holy in Nature Neuroscience (2010)

  15. No Access

    Article

    Representation and transformation of sensory information in the mouse accessory olfactory system

    In mice, social odors activate vomeronasal sensory neurons (VSNs); a large percentage of VSNs detect sulfated steroids. Here, the authors find that information about these molecules is conveyed through just a ...

    Julian P Meeks, Hannah A Arnson, Timothy E Holy in Nature Neuroscience (2010)

  16. No Access

    Article

    Pavlov's moth: olfactory learning and spike timing–dependent plasticity

    Spike-timing dependent plasticity is a favored synaptic mechanism for learning. However, a surprising new study by Ito and colleagues in the insect mushroom body suggests that it cannot account for a paradigma...

    Julian P Meeks, Timothy E Holy in Nature Neuroscience (2008)

  17. No Access

    Article

    Olfactory coding: sniffing out signals

    A report in Nature describes a physiological screen used to identify a previously unknown chemical signal in mouse urine. The chemical's selective response in the olfactory bulb raises interesting questions for h...

    Francesco Nodari, Timothy E Holy in Nature Neuroscience (2005)