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  1. Article

    Open Access

    Diversity and dissemination of viruses in pathogenic protozoa

    Viruses are the most abundant biological entities on Earth and play a significant role in the evolution of many organisms and ecosystems. In pathogenic protozoa, the presence of viruses has been linked to an i...

    Senne Heeren, Ilse Maes, Mandy Sanders, Lon-Fye Lye, Vanessa Adaui in Nature Communications (2023)

  2. No Access

    Article

    Leishmania genetic exchange is mediated by IgM natural antibodies

    Host factors that mediate Leishmania genetic exchange are not well defined. Here we demonstrate that natural IgM (IgMn)14 antibodies mediate parasite genetic exchange by inducing the transient formation of a sph...

    Tiago D. Serafim, Eva Iniguez, Ana Beatriz F. Barletta, Pedro Cecilio in Nature (2023)

  3. No Access

    Article

    The Evolutionary Loss of RNAi Key Determinants in Kinetoplastids as a Multiple Sporadic Phenomenon

    We screened the genomes of a broad panel of kinetoplastid protists for genes encoding proteins associated with the RNA interference (RNAi) system using probes from the Argonaute (AGO1), Dicer1 (DCL1), and Dice...

    Andrey V. Matveyev, João M. P. Alves, Myrna G. Serrano in Journal of Molecular Evolution (2017)

  4. Article

    Open Access

    Comparative genomic analysis of Leishmania (Viannia) peruviana and Leishmania (Viannia) braziliensis

    The Leishmania (Viannia) braziliensis complex is responsible for most cases of New World tegumentary leishmaniasis. This complex includes two closely related species but with different geographic distribution and...

    Hugo O. Valdivia, João L. Reis-Cunha, Gabriela F. Rodrigues-Luiz in BMC Genomics (2015)

  5. No Access

    Article

    CRISPR for Cryptosporidium

    Study of the diarrhoea-causing pathogen Cryptosporidium has been hindered by a lack of genetic-modification and culture tools. A description of genome editing and propagation methods for the parasite changes this...

    Stephen M. Beverley in Nature (2015)

  6. Article

    Open Access

    REDHORSE-REcombination and Double crossover detection in Haploid Organisms using next-geneRation SEquencing data

    Next-generation sequencing technology provides a means to study genetic exchange at a higher resolution than was possible using earlier technologies. However, this improvement presents challenges as the alignm...

    Jahangheer S Shaik, Asis Khan, Stephen M Beverley, L David Sibley in BMC Genomics (2015)

  7. No Access

    Protocol

    A Transposon-Based Tool for Transformation and Mutagenesis in Trypanosomatid Protozoa

    The ability of transposable elements to mobilize across genomes and affect the expression of genes makes them exceptional tools for genetic manipulation methodologies. Several transposon-based systems have bee...

    Jeziel D. Damasceno, Stephen M. Beverley, Luiz R. O. Tosi in Parasite Genomics Protocols (2015)

  8. No Access

    Article

    A transposon toolkit for gene transfer and mutagenesis in protozoan parasites

    Protozoan parasites affect millions of people around the world. Treatment and control of these diseases are complicated partly due to the intricate biology of these organisms. The interactions of species of Plasm...

    Jeziel D. Damasceno, Stephen M. Beverley, Luiz R. O. Tosi in Genetica (2010)

  9. No Access

    Chapter

    Sphingolipids in Parasitic Protozoa

    The surface of most protozoan parasites relies heavily upon lipid-anchored molecules, to form protective barriers and play critical functions required for infectivity. Sphingolipids (SLs) play impo...

    Kai Zhang, James D. Bangs in Sphingolipids as Signaling and Regulatory … (2010)

  10. No Access

    Article

    PTR1-dependent synthesis of tetrahydrobiopterin contributes to oxidant susceptibility in the trypanosomatid protozoan parasite Leishmania major

    Leishmania must survive oxidative stress, but lack many classical antioxidant enzymes and rely heavily on trypanothione-dependent pathways. We used forward genetic screens to recover loci...

    Bakela Nare, Levi A. Garraway, Tim J. Vickers, Stephen M. Beverley in Current Genetics (2009)

  11. Article

    Characterization of inositol phosphorylceramides from Leishmania major by tandem mass spectrometry with electrospray ionization

    We describe tandem mass spectrometric approaches, including multiple stage ion-trap and source collisionally activated dissociation (CAD) tandem mass spectrometry with electrospray ionization (ESI) to characte...

    Fong-Fu Hsu, John Turk, Kai Zhang in Journal of the American Society for Mass S… (2007)

  12. No Access

    Article

    Central memory T cells mediate long-term immunity to Leishmania major in the absence of persistent parasites

    Infection with Leishmania major induces a protective immune response and long-term resistance to reinfection, which is thought to depend upon persistent parasites. Here we demonstrate that although effector CD4+ ...

    Colby Zaph, Jude Uzonna, Stephen M Beverley, Phillip Scott in Nature Medicine (2004)

  13. No Access

    Protocol

    In Vitro Shuttle Mutagenesis Using Engineered Mariner Transposons

    Advances in our understanding of the protozoan parasite Leishmania have been facilitated by the development of molecular and genetic tools. One powerful approach for gene identification and analysis is transposon...

    Kelly A. Robinson, Sophie Goyard, Stephen M. Beverley in Parasite Genomics Protocols (2004)

  14. No Access

    Article

    Protozomics: trypanosomatid parasite genetics comes of age

  15. Trypanosomatid protozoans are responsible for some of the most devastating and, as yet, poorly controlled diseases of tropical and semi-tropical countries.

    ...
  16. Stephen M. Beverley in Nature Reviews Genetics (2003)

  17. No Access

    Article

    The Leishmania genome project: new insights into gene organization and function

    The sequencing of Leishmania major Friedlin chromosome 1 (Chr1), Chr3, and Chr4 has been completed, and several other chromosomes are well underway. The complete genome sequence should be available by 2003. Over...

    Peter J. Myler, Stephen M. Beverley, Angela K. Cruz in Medical Microbiology and Immunology (2001)

  18. No Access

    Article

    Dual role of the fringe connection gene in both heparan sulphate and fringe-dependent signalling events

    The precise regulation of growth factor signalling is crucial to the molecular control of development in Drosophila. Post-translational modification of signalling molecules is one of the mechanisms that modulate ...

    Erica M. Selva, Kyoungja Hong, Gyeong-Hun Baeg, Stephen M. Beverley in Nature Cell Biology (2001)

  19. No Access

    Article

    Pteridine reductase mechanism correlates pterin metabolism with drug resistance in trypanosomatid parasites

    Pteridine reductase (PTR1) is a short-chain reductase (SDR) responsible for the salvage of pterins in parasitic trypanosomatids. PTR1 catalyzes the NADPH-dependent two-step reduction of oxidized pterins to the...

    David G. Gourley, Alexander W. Schüttelkopf, Gordon A. Leonard in Nature Structural Biology (2001)

  20. No Access

    Protocol

    Transfection ofLeishmania and Trypanosoma brucei by Electroporation

    DNA transfection is the introduction of molecular constructs into parasites in a manner permitting the expression of encoded genes. Transfection is an exceedingly powerful technique for analyzing gen etic regu...

    Stephen M. Beverley, Christine E. Clayton in Protocols in Molecular Parasitology (1993)

  21. No Access

    Article

    Gene replacement in parasitic protozoa

    TRYPANOSOMATID protozoa frequently cause severe diseases in humans. Many molecules likely to have a role during the infectious cycle have been identified, yet proof of their function is often lacking. We descr...

    Angela Cruz, Stephen M. Beverley in Nature (1990)

  22. No Access

    Chapter

    Unstable and Stable Gene Amplification in Methotrexate-Resistant Leishmania Major and Natural Isolates of Leishmania Tarentolae

    One mechanism that cells and organisms can employ to increase the level of gene expression is that of specific gene amplification. This process has been most intensively studied in tumor cells exhibiting ampli...

    Stephen M. Beverley, Thomas E. Ellenberger, Maria Petrillo-Peixoto in Leishmaniasis (1989)

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