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  1. No Access

    Protocol

    Molecular Tension Probe for In Vitro Bioassays

    Cell-free bioassays (CFBs) provide their own distinctive merits over cell-based bioassays (CBBs) including (i) rapid and on-site applicability, (ii) long-term utility, and (iii) bioanalytical versatility. The ...

    Sung-Bae Kim, Rika Fujii, Simon Miller, Mikio Tanabe in Bioluminescence (2022)

  2. No Access

    Article

    Isoform-selective regulation of mammalian cryptochromes

    CRY1 and CRY2 are essential components of the circadian clock controlling daily physiological rhythms. Accumulating evidences indicate distinct roles of these highly homologous proteins, in addition to redunda...

    Simon Miller, You Lee Son, Yoshiki Aikawa, Eri Makino in Nature Chemical Biology (2020)

  3. No Access

    Article

    COMPASS II: extended coverage for polymer and drug-like molecule databases

    The COMPASS II force field has been developed by extending the coverage of the COMPASS force field (J Phys Chem B 102(38):7338–7364, 1998) to polymer and drug-like molecules found in popular databases. Using a fr...

    Huai Sun, Zhao **, Chunwei Yang, Reinier L. C. Akkermans in Journal of Molecular Modeling (2016)

  4. No Access

    Protocol

    A Bioluminescence Assay System for Imaging Metal Cationic Activities in Urban Aerosols

    A bioluminescence-based assay system was fabricated for an efficient determination of the activities of air pollutants. The following four components were integrated into this assay system: (1) an 8-channel as...

    Sung-Bae Kim, Ryuichi Naganawa, Shingo Murata, Takayoshi Nakayama in Bioluminescence (2016)

  5. No Access

    Article

    Cation-driven Optical Properties of Artificial Luciferases

    The present study demonstrates cation-driven optical properties of artificial luciferases (ALucs) from copepod luciferases, as an optical readout for bioanalysis. An assignment of the supersecondary structure ...

    Sung Bae Kim, Simon Miller, Nobuhiro Suzuki, Toshiya Senda in Analytical Sciences (2015)

  6. Chapter

    Hotspots Analysis: Providing the Focus for Action

    The technique ‘hotspots analysis’ belongs to the toolbox life cycle management. ‘Hotspotting’ or ‘hotspots analysis’ is an emergent technique being used in a growing number of different analytical disciplines,...

    Mark Barthel, James A. Fava, Curtis A. Harnanan, Philip Strothmann in Life Cycle Management (2015)

  7. No Access

    Article

    Dysphagia in Duchenne Muscular Dystrophy Assessed Objectively by Surface Electromyography

    Objective swallowing assessment is indicated in the management of patients with Duchenne muscular dystrophy (DMD). Surface electromyography (sEMG) provides a non-invasive, objective method of quantifying muscl...

    Sally K. Archer, Rachel Garrod, Nicholas Hart, Simon Miller in Dysphagia (2013)

  8. No Access

    Article

    Interval type-2 fuzzy modelling and stochastic search for real-world inventory management

    Real-world systems present a variety of challenges to the modeller, not least of which is the problem of uncertainty inherent in their operation. In this research, an interval type-2 fuzzy model is applied to ...

    Simon Miller, Mario Gongora, Jon Garibaldi, Robert John in Soft Computing (2012)

  9. No Access

    Chapter and Conference Paper

    Interval Type-2 Fuzzy Modelling and Simulated Annealing for Real-World Inventory Management

    The modelling of real-world complex systems is an area of ongoing interest for the research community. Real-world systems present a variety of challenges not least of which is the problem of uncertainty inhere...

    Simon Miller, Mario Gongora, Robert John in Hybrid Artificial Intelligent Systems (2011)

  10. Article

    Correction: Corrigendum: The p110δ structure: mechanisms for selectivity and potency of new PI(3)K inhibitors

    Nat. Chem. Biol. 6, 117–124 (2010); published online 10 January 2010; corrected after print 12 February 2010 and 2 March 2010 In the version of this article initially published, the structure of p110δ in compl...

    Alex Berndt, Simon Miller, Olusegun Williams, Daniel D Le in Nature Chemical Biology (2010)

  11. Article

    Correction: Corrigendum: The p110δ structure: mechanisms for selectivity and potency of new PI(3)K inhibitors

    Nat. Chem. Biol. 6, 117–124 (2010); published online 10 January 2010; corrected after print 12 February 2010 In the version of this article initially published, **da Ren was inadvertently left off the author...

    Alex Berndt, Simon Miller, Olusegun Williams, Daniel D Le in Nature Chemical Biology (2010)

  12. No Access

    Article

    The p110δ structure: mechanisms for selectivity and potency of new PI(3)K inhibitors

    Upregulation of PI(3)K signaling pathways is implicated in many diseases, and a number of inhibitors are currently in clinical development. The structure of a PI(3)Kδ kinase domain, along with co-complexes wit...

    Alex Berndt, Simon Miller, Olusegun Williams, Daniel D Le in Nature Chemical Biology (2010)

  13. No Access

    Chapter and Conference Paper

    An Interval Type-2 Fuzzy Multiple Echelon Supply Chain Model

    Planning resources for a supply chain is a major factor determining its success or failure. In this paper we build on previous work introducing an Interval Type-2 Fuzzy Logic model of a multiple echelon supply ch...

    Simon Miller, Robert John in Research and Development in Intelligent Systems XXVI (2010)