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  1. Article

    Open Access

    Ningetinib, a novel FLT3 inhibitor, overcomes secondary drug resistance in acute myeloid leukemia

    FMS-like tyrosine kinase 3 internal tandem duplication (FLT3-ITD) is a common mutation type in acute myeloid leukemia (AML) and is usually associated with poor patient prognosis. With advancements in molecular...

    Chuhong Hu, Yvyin Zhang, Jie Yang, Yanli Xu in Cell Communication and Signaling (2024)

  2. Article

    Open Access

    The circadian gene ARNTL2 promotes nasopharyngeal carcinoma invasiveness and metastasis through suppressing AMOTL2-LATS-YAP pathway

    Metastasis is the major culprit of treatment failure in nasopharyngeal carcinoma (NPC). Aryl hydrocarbon receptor nuclear translocator like 2 (ARNTL2), a core circadian gene, plays a crucial role in the develo...

    Wenqing Zou, Yiming Lei, Cong Ding, Hongjun **ao, Shunxin Wang in Cell Death & Disease (2024)

  3. Article

    Open Access

    Recurrent neural network for predicting absence of heterozygosity from low pass WGS with ultra-low depth

    The absence of heterozygosity (AOH) is a kind of genomic change characterized by a long contiguous region of homozygous alleles in a chromosome, which may cause human genetic disorders. However, no method of l...

    Fei Tang, Zhonghua Wang, Yan Sun, Linlin Fan, Yun Yang, Xueqin Guo in BMC Genomics (2024)

  4. Article

    Open Access

    Deficiency of skeletal muscle Agrin contributes to the pathogenesis of age-related sarcopenia in mice

    Sarcopenia, a progressive and prevalent neuromuscular disorder, is characterized by age-related muscle wasting and weakening. Despite its widespread occurrence, the molecular underpinnings of this disease rema...

    Jie Chen, Hong Chen, **a Dong, Tiankun Hui, Min Yan, Dongyan Ren in Cell Death & Disease (2024)

  5. No Access

    Chapter and Conference Paper

    Learning an Adaptive Self-expressive Fusion Model for Multi-omics Cancer Subtype Prediction

    The discovery of cancer subtypes has helped researchers gain deeper insights into the study of oncology heterogeneity. However, since cancer complexity exists at various omics levels, extracting and fusing com...

    Yueyi Cai, Nan Zhou, Junran Zhao, Shunfang Wang in Bioinformatics Research and Applications (2024)

  6. Article

    Open Access

    HostNet: improved sequence representation in deep neural networks for virus-host prediction

    The escalation of viruses over the past decade has highlighted the need to determine their respective hosts, particularly for emerging ones that pose a potential menace to the welfare of both human and animal ...

    Zhaoyan Ming, **angjun Chen, Shunlong Wang, Hong Liu, Zhiming Yuan in BMC Bioinformatics (2023)

  7. Article

    Open Access

    Overexpression of ZNF488 supports pancreatic cancer cell proliferation and tumorigenesis through inhibition of ferroptosis via regulating SCD1-mediated unsaturated fatty acid metabolism

    Pancreatic cancer is a malignancy with high mortality. Once diagnosed, effective treatment strategies are limited and the five-year survival is extremely poor. Recent studies have shown that zinc finger protei...

    Qifeng **ao, Zhongmin Lan, Shuisheng Zhang, Hu Ren, Shunda Wang in Biology Direct (2023)

  8. Article

    Open Access

    Native microbiome dominates over host factors in sha** the probiotic genetic evolution in the gut

    Probiotics often acquire potentially adaptive mutations in vivo, gaining new functional traits through gut selection. While both the host and microbiome can contribute to probiotics’ genetic evolution, separat...

    Shuaiming Jiang, Chengcheng Zhang, Zhe Han, Wenyao Ma in npj Biofilms and Microbiomes (2023)

  9. Article

    Open Access

    RNF173 suppresses RAF/MEK/ERK signaling to regulate invasion and metastasis via GRB2 ubiquitination in Hepatocellular Carcinoma

    The role of the membrane-associated RING-CH (MARCH) family in carcinogenesis has been widely studied, but the member of this family, RNF173, has not yet been thoroughly explored in the context of hepatocellula...

    Jie Zhou, Daoyuan Tu, Rui Peng, Yuhong Tang in Cell Communication and Signaling (2023)

  10. Article

    Open Access

    Knockdown of ELF4 aggravates renal injury in ischemia/reperfusion mice through promotion of pyroptosis, inflammation, oxidative stress, and endoplasmic reticulum stress

    Renal ischemia/reperfusion (I/R) injury is a major cause of acute kidney injury (AKI). Dysfunction of E74-like ETS transcription factor 4 (ELF4) leads to inflammation. This research intended to look into the f...

    Li Li, Shunying Wang, Wenming Wang in BMC Molecular and Cell Biology (2023)

  11. Article

    Open Access

    Stable maternal proteins underlie distinct transcriptome, translatome, and proteome reprogramming during mouse oocyte-to-embryo transition

    The oocyte-to-embryo transition (OET) converts terminally differentiated gametes into a totipotent embryo and is critically controlled by maternal mRNAs and proteins, while the genome is silent until zygotic g...

    Hongmei Zhang, Shuyan Ji, Ke Zhang, Yuling Chen, Jia Ming, Feng Kong in Genome Biology (2023)

  12. Article

    Comparative transcriptome sequencing analysis to postulate the scheme of regulated leaf coloration in Perilla frutescens

    Perilla as herb, ornamental, oil and edible plant is widely used in East Asia. Until now, the mechanism of regulated leaf coloration is still unclear. In this study, four different kinds of leaf colors were us...

    **aoning Liu, Yanning Zhai, **gyu Liu, **gqi Xue in Plant Molecular Biology (2023)

  13. No Access

    Chapter and Conference Paper

    Physiological Polyphosphate: A New Molecular Paradigm in Biomedical and Biocomputational Applications for Human Therapy

    Inorganic polyphosphates (polyP) consist of linear chains of orthophosphate units linked together by high-energy phosphoanhydride bonds. The family of polyP molecules are evolutionarily old biopolymers and fou...

    Werner E. G. Müller, Shunfeng Wang in Bioinformatics and Biomedical Engineering (2023)

  14. Article

    Open Access

    Knockout of integrin β1 in induced pluripotent stem cells accelerates skin-wound healing by promoting cell migration in extracellular matrix

    Induced pluripotent stem cells (iPSCs) have the potential to promote wound healing; however, their adhesion to the extracellular matrix (ECM) might decrease iPSC migration, thereby limiting their therapeutic p...

    Yansong Ren, **bo Liu, Huijun Xu, Shun Wang, Shirui Li in Stem Cell Research & Therapy (2022)

  15. Article

    Open Access

    LRP4 is required for the olfactory association task in the piriform cortex

    Low-density lipoprotein receptor-related protein 4 (LRP4) plays a critical role in the central nervous system (CNS), including hippocampal synaptic plasticity, maintenance of excitatory synaptic transmission, ...

    Min Yan, Mingtao **ong, Yongqiang Wu, Dong Lin, Peng Chen, Jiang Chen in Cell & Bioscience (2022)

  16. No Access

    Article

    CAV1 is a prognostic predictor for patients with idiopathic pulmonary fibrosis and lung cancer

    The extremely high mortality of both lung cancer and Idiopathic pulmonary fibrosis (IPF) is a global threat. Early detection and diagnosis can reduce their mortality. Since fibrosis is a necessary process of c...

    Dongdong Yin, Jiayang Qiu, Suxia Hu, Longqiang Cheng, Hui Li in Journal of Biosciences (2022)

  17. No Access

    Chapter

    Polyphosphate in Chronic Wound Healing: Restoration of Impaired Metabolic Energy State

    Many pathological conditions are characterized by a deficiency of metabolic energy. A prominent example is nonhealing or difficult-to-heal chronic wounds. Because of their unique ability to serve as a source o...

    **aohong Wang, Hadrian Schepler, Meik Neufurth, Shunfeng Wang in Inorganic Polyphosphates (2022)

  18. No Access

    Chapter

    Biomimetic Polyphosphate Materials: Toward Application in Regenerative Medicine

    In recent years, inorganic polyphosphate (polyP) has attracted increasing attention as a biomedical polymer or biomaterial with a great potential for application in regenerative medicine, in particular in the ...

    Heinz C. Schröder, **aohong Wang, Meik Neufurth, Shunfeng Wang in Inorganic Polyphosphates (2022)

  19. Article

    Open Access

    Gene prediction of aging-related diseases based on DNN and Mashup

    At present, the bioinformatics research on the relationship between aging-related diseases and genes is mainly through the establishment of a machine learning multi-label model to classify each gene. Most of t...

    Junhua Ye, Shunfang Wang, **n Yang, **anjun Tang in BMC Bioinformatics (2021)

  20. Article

    Open Access

    Mkx mediates tenogenic differentiation but incompletely inhibits the proliferation of hypoxic MSCs

    Hypoxia has been shown to be able to induce tenogenic differentiation and proliferation of mesenchymal stem cells (MSCs) which lead hypoxia-induced MSCs to be a potential treatment for tendon injury. However, ...

    Guanyin Chen, Dong Fan, Wangqian Zhang, Shuning Wang in Stem Cell Research & Therapy (2021)

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