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  1. Article

    Open Access

    Evaluating the usefulness of alignment filtering methods to reduce the impact of errors on evolutionary inferences

    Multiple Sequence Alignments (MSAs) are the starting point of molecular evolutionary analyses. Errors in MSAs generate a non-historical signal that can lead to incorrect inferences. Therefore, numerous efforts...

    Arnaud Di Franco, Raphaël Poujol, Denis Baurain, Hervé Philippe in BMC Evolutionary Biology (2019)

  2. Article

    Open Access

    BisQC: an operational pipeline for multiplexed bisulfite sequencing

    Bisulfite sequencing is the most efficient single nucleotide resolution method for analysis of methylation status at whole genome scale, but improved quality control metrics are needed to better standardize ex...

    Gary G Chen, Alpha B Diallo, Raphaël Poujol, Corina Nagy, Alfredo Staffa in BMC Genomics (2014)