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  1. Article

    Open Access

    Nociceptor neurons affect cancer immunosurveillance

    Solid tumours are innervated by nerve fibres that arise from the autonomic and sensory peripheral nervous systems15. Whether the neo-innervation of tumours by pain-initiating sensory neurons affects cancer immun...

    Mohammad Balood, Maryam Ahmadi, Tuany Eichwald, Ali Ahmadi, Abdelilah Majdoubi in Nature (2022)

  2. Article

    Author Correction: Widespread long-range cis-regulatory elements in the maize genome

    An amendment to this paper has been published and can be accessed via a link at the top of the paper.

    William A. Ricci, Zefu Lu, Lexiang Ji, Alexandre P. Marand in Nature Plants (2020)

  3. No Access

    Article

    Widespread long-range cis-regulatory elements in the maize genome

    Genetic map** studies on crops suggest that agronomic traits can be controlled by gene–distal intergenic loci. Despite the biological importance and the potential agronomic utility of these loci, they remain...

    William A. Ricci, Zefu Lu, Lexiang Ji, Alexandre P. Marand in Nature Plants (2019)

  4. Article

    Open Access

    Rational development of transformation in Clostridium thermocellum ATCC 27405 via complete methylome analysis and evasion of native restriction–modification systems

    A major barrier to both metabolic engineering and fundamental biological studies is the lack of genetic tools in most microorganisms. One example is Clostridium thermocellum ATCC 27405T, where genetic tools are n...

    Lauren A. Riley, Lexiang Ji in Journal of Industrial Microbiology & Biote… (2019)

  5. No Access

    Article

    Multiple genes recruited from hormone pathways partition maize diterpenoid defences

    Duplication and divergence of primary pathway genes underlie the evolution of plant specialized metabolism; however, mechanisms partitioning parallel hormone and defence pathways are often speculative. For exa...

    Yezhang Ding, Katherine M. Murphy, Elly Poretsky, Sibongile Mafu in Nature Plants (2019)

  6. Article

    Open Access

    TET-mediated epimutagenesis of the Arabidopsis thaliana methylome

    DNA methylation in the promoters of plant genes sometimes leads to transcriptional repression, and the loss of DNA methylation in methyltransferase mutants results in altered gene expression and severe develop...

    Lexiang Ji, William T. Jordan, **uling Shi, Lulu Hu, Chuan He in Nature Communications (2018)

  7. Article

    Open Access

    The evolution of CHROMOMETHYLASES and gene body DNA methylation in plants

    The evolution of gene body methylation (gbM), its origins, and its functional consequences are poorly understood. By pairing the largest collection of transcriptomes (>1000) and methylomes (77) across Viridipl...

    Adam J. Bewick, Chad E. Niederhuth, Lexiang Ji, Nicholas A. Rohr in Genome Biology (2017)

  8. Article

    Open Access

    Dynamic changes in the transcriptome of Populus hopeiensis in response to abscisic acid

    Abscisic acid (ABA) plays a fundamental role in plant response and adaptation to abiotic stresses, such as drought, high salinity and low temperature. Populus hopeiensis exhibits exceptional tolerance to water-de...

    Zhong Chen, Lexiang Ji, Jia Wang, **pu **, **aoyu Yang, Pian Rao in Scientific Reports (2017)

  9. Article

    Open Access

    Widespread natural variation of DNA methylation within angiosperms

    DNA methylation is an important feature of plant epigenomes, involved in the formation of heterochromatin and affecting gene expression. Extensive variation of DNA methylation patterns within a species has bee...

    Chad E. Niederhuth, Adam J. Bewick, Lexiang Ji, Magdy S. Alabady in Genome Biology (2016)

  10. Article

    Open Access

    Full-length autonomous transposable elements are preferentially targeted by expression-dependent forms of RNA-directed DNA methylation

    Chromatin modifications such as DNA methylation are targeted to transposable elements by small RNAs in a process termed RNA-directed DNA methylation (RdDM). In plants, canonical RdDM functions through RNA poly...

    Kaushik Panda, Lexiang Ji, Drexel A. Neumann, Josquin Daron in Genome Biology (2016)

  11. No Access

    Article

    Identification of glutathione S-transferase genes responding to pathogen infestation in Populus tomentosa

    Stem blister canker, caused by Botryosphaeria dothidea, is becoming the most serious disease of poplar in China. The molecular basis of the poplar in response to stem blister canker is not well understood. To rev...

    Weihua Liao, Lexiang Ji, Jia Wang, Zhong Chen in Functional & Integrative Genomics (2014)

  12. Article

    Open Access

    Study of seed hair growth in Populus tomentosa, an important character of female floral bud development

    Poplar seed hair is an environmental annoyance in northern China due to its abundance and widespread airborne distribution after maturation. The morphogenesis and molecular mechanisms of its development are no...

    Meixia Ye, Zhong Chen, **aoxing Su, Lexiang Ji, Jia Wang, Weihua Liao in BMC Genomics (2014)