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  1. Article

    Open Access

    Low-input PacBio sequencing generates high-quality individual fly genomes and characterizes mutational processes

    Long-read sequencing, exemplified by PacBio, revolutionizes genomics, overcoming challenges like repetitive sequences. However, the high DNA requirement ( > 1 µg) is prohibitive for small organisms. We develop...

    Hangxing Jia, Shengjun Tan, Yingao Cai, Yanyan Guo, Jieyu Shen in Nature Communications (2024)

  2. Article

    Open Access

    Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences

    Polyploidy or whole-genome duplication (WGD) is a major event that drastically reshapes genome architecture and is often assumed to be causally associated with organismal innovations and radiations. The 2R hyp...

    Daqi Yu, Yandong Ren, Masahiro Uesaka, Alan J. S. Beavan in Nature Ecology & Evolution (2024)

  3. Article

    Open Access

    DNA transposons mediate duplications via transposition-independent and -dependent mechanisms in metazoans

    Despite long being considered as “junk”, transposable elements (TEs) are now accepted as catalysts of evolution. One example is Mutator-like elements (MULEs, one type of terminal inverted repeat DNA TEs, or TIR T...

    Shengjun Tan, Hui**g Ma, **bo Wang, Man Wang, Mengxia Wang in Nature Communications (2021)