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  1. Article

    Open Access

    Chromatin attachment to the nuclear matrix represses hypocotyl elongation in Arabidopsis thaliana

    The nuclear matrix is a nuclear compartment that has diverse functions in chromatin regulation and transcription. However, how this structure influences epigenetic modifications and gene expression in plants i...

    Linhao Xu, Shiwei Zheng, Katja Witzel, Eveline Van De Slijke in Nature Communications (2024)

  2. Article

    Open Access

    Monitoring of drought stress and transpiration rate using proximal thermal and hyperspectral imaging in an indoor automated plant phenoty** platform

    Thermography is a popular tool to assess plant water-use behavior, as plant temperature is influenced by transpiration rate, and is commonly used in field experiments to detect plant water deficit. Its applica...

    Stien Mertens, Lennart Verbraeken, Heike Sprenger, Sam De Meyer in Plant Methods (2023)

  3. No Access

    Article

    SIAMESE-RELATED1 imposes differentiation of stomatal lineage ground cells into pavement cells

    The leaf epidermis represents a multifunctional tissue consisting of trichomes, pavement cells and stomata, the specialized cellular pores of the leaf. Pavement cells and stomata both originate from regulated ...

    Marieke Dubois, Ignacio Achon, Robert A. Brench, Stefanie Polyn in Nature Plants (2023)

  4. Article

    Open Access

    IMPLANT: a new technique for transgene copy number estimation in plants using a single end-point PCR reaction

    Copy number determination is one of the first steps in the characterization of transgenic plant lines. The classical approach to this, Southern blotting, is time-consuming, expensive and requires massive amoun...

    Jonas De Saeger, Jihae Park, Kai Thoris, Charlotte De Bruyn, Hoo Sun Chung in Plant Methods (2022)

  5. Article

    Open Access

    Correction to: CIN‑like TCP13 is essential for plant growth regulation under dehydration stress

    Kaoru Urano, Kyonoshin Maruyama, Tomotsugu Koyama in Plant Molecular Biology (2022)

  6. Article

    Open Access

    The heat is on: a simple method to increase genome editing efficiency in plants

    Precision genome mutagenesis using CRISPR/Cas has become the standard method to generate mutant plant lines. Several improvements have been made to increase mutagenesis efficiency, either through vector optimi...

    Jonas Blomme, Ward Develtere, Ayse Köse, Júlia Arraiza Ribera in BMC Plant Biology (2022)

  7. Article

    Open Access

    CIN-like TCP13 is essential for plant growth regulation under dehydration stress

    A dehydration-inducible Arabidopsis CIN-like TCP gene, TCP13, acts as a key regulator of plant growth in leaves and roots under dehydration stress conditions.

    Kaoru Urano, Kyonoshin Maruyama, Tomotsugu Koyama in Plant Molecular Biology (2022)

  8. No Access

    Chapter and Conference Paper

    Analysis of Plant Stress Response Using Hyperspectral Imaging and Kernel Ridge Regression

    The optical signature of a plant is an essential tool in predicting vegetation water content for quantitative assessment of plant status under drought stress. Plant responses to water stress may involve optica...

    Mohd Shahrimie Mohd Asaari, Stien Mertens in Proceedings of the 11th International Conf… (2022)

  9. Article

    Open Access

    Root engineering in maize by increasing cytokinin degradation causes enhanced root growth and leaf mineral enrichment

    Root-specific expression of a cytokinin-degrading CKX gene in maize roots causes formation of a larger root system leading to higher element content in shoot organs.

    Eswarayya Ramireddy, Hilde Nelissen, Jan Erik Leuendorf in Plant Molecular Biology (2021)

  10. Article

    Open Access

    Development of a novel and rapid phenotype-based screening method to assess rice seedling growth

    Rice (Oryza sativa) is one of the most important model crops in plant research. Despite its considerable advantages, (phenotypic) bioassays for rice are not as well developed as for Arabidopsis thaliana. Here, we...

    Lena Vlaminck, Chananchida Sang-Aram, Deborah Botterman in Plant Methods (2020)

  11. Article

    Open Access

    Tap** into the maize root microbiome to identify bacteria that promote growth under chilling conditions

    When maize (Zea mays L.) is grown in the Northern hemisphere, its development is heavily arrested by chilling temperatures, especially at the juvenile phase. As some endophytes are beneficial for plants under str...

    Stien Beirinckx, Tom Viaene, Annelies Haegeman, Jane Debode, Fien Amery in Microbiome (2020)

  12. No Access

    Article

    A genetics screen highlights emerging roles for CPL3, RST1 and URT1 in RNA metabolism and silencing

    Post-transcriptional gene silencing (PTGS) is a major mechanism regulating gene expression in higher eukaryotes. To identify novel players in PTGS, a forward genetics screen was performed on an Arabidopsis thalia...

    Ting Li, Annelore Natran, Yanjun Chen, Jasmien Vercruysse, Kun Wang in Nature Plants (2019)

  13. No Access

    Article

    The role of HEXOKINASE1 in Arabidopsis leaf growth

    Here, we used a hxk1 mutant in the Col-0 background. We demonstrated that HXK1 regulates cell proliferation and expansion early during leaf development, and that HXK1 is involved in sucrose-induced leaf growth st...

    Judith Van Dingenen, Mattias Vermeersch, Liesbeth De Milde in Plant Molecular Biology (2019)

  14. Article

    Open Access

    Robust increase of leaf size by Arabidopsis thaliana GRF3-like transcription factors under different growth conditions

    An increase in crop yield is essential to reassure food security to meet the accelerating global demand. Several genetic modifications can increase organ size, which in turn might boost crop yield. Still, only...

    Matías Beltramino, María Florencia Ercoli, Juan Manuel Debernardi in Scientific Reports (2018)

  15. Article

    Open Access

    Correction: Author Correction: The transcriptional repressor complex FRS7-FRS12 regulates flowering time and growth in Arabidopsis

    Nature Communications 8: Article number: 15235 (2017); Published online: 11 May 2017; Updated: 10 April 2018 The financial support for this Article was not correctly acknowledged. The Acknowledgements incorrec...

    Andrés Ritter, Sabrina Iñigo, Patricia Fernández-Calvo in Nature Communications (2018)

  16. Article

    Open Access

    The transcriptional repressor complex FRS7-FRS12 regulates flowering time and growth in Arabidopsis

    Most living organisms developed systems to efficiently time environmental changes. The plant-clock acts in coordination with external signals to generate output responses determining seasonal growth and flower...

    Andrés Ritter, Sabrina Iñigo, Patricia Fernández-Calvo in Nature Communications (2017)

  17. Article

    Open Access

    Altered expression of maize PLASTOCHRON1 enhances biomass and seed yield by extending cell division duration

    Maize is the highest yielding cereal crop grown worldwide for grain or silage. Here, we show that modulating the expression of the maize PLASTOCHRON1 (ZmPLA1) gene, encoding a cytochrome P450 (CYP78A1), results i...

    **aohuan Sun, James Cahill, Tom Van Hautegem, Kim Feys in Nature Communications (2017)

  18. Article

    Open Access

    SCFSAP controls organ size by targeting PPD proteins for degradation in Arabidopsis thaliana

    Control of organ size by cell proliferation and growth is a fundamental process, but the mechanisms that determine the final size of organs are largely elusive in plants. We have previously revealed that the u...

    Zhibiao Wang, Na Li, Shan Jiang, Nathalie Gonzalez, **ahe Huang in Nature Communications (2016)

  19. Article

    Open Access

    Diffany: an ontology-driven framework to infer, visualise and analyse differential molecular networks

    Differential networks have recently been introduced as a powerful way to study the dynamic rewiring capabilities of an interactome in response to changing environmental conditions or stimuli. Currently, such d...

    Sofie Van Landeghem, Thomas Van Parys, Marieke Dubois, Dirk Inzé in BMC Bioinformatics (2016)

  20. Article

    Open Access

    An integrated network of Arabidopsis growth regulators and its use for gene prioritization

    Elucidating the molecular mechanisms that govern plant growth has been an important topic in plant research and current advances in large-scale data generation call for computational tools that efficiently com...

    Ehsan Sabaghian, Zuzanna Drebert, Dirk Inzé, Yvan Saeys in Scientific Reports (2015)

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