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  1. Article

    Open Access

    Astronaut omics and the impact of space on the human body at scale

    Future multi-year crewed planetary missions will motivate advances in aerospace nutrition and telehealth. On Earth, the Human Cell Atlas project aims to spatially map all cell types in the human body. Here, we...

    Lindsay A. Rutter, Henry Cope, Matthew J. MacKay, Raúl Herranz in Nature Communications (2024)

  2. Article

    Open Access

    Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions

    In less than nine months, the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) killed over a million people, including >25,000 in New York City (NYC) alone. The COVID-19 pandemic caused by SARS-CoV...

    Daniel Butler, Christopher Mozsary, Cem Meydan, Jonathan Foox in Nature Communications (2021)

  3. Article

    Open Access

    Single-molecule sequencing detection of N6-methyladenine in microbial reference materials

    The DNA base modification N6-methyladenine (m6A) is involved in many pathways related to the survival of bacteria and their interactions with hosts. Nanopore sequencing offers a new, portable method to detect bas...

    Alexa B. R. McIntyre, Noah Alexander, Kirill Grigorev in Nature Communications (2019)

  4. Article

    Open Access

    Multi-drug resistant Enterobacter bugandensis species isolated from the International Space Station and comparative genomic analyses with human pathogenic strains

    The antimicrobial resistance (AMR) phenotypic properties, multiple drug resistance (MDR) gene profiles, and genes related to potential virulence and pathogenic properties of five Enterobacter bugandensis strains ...

    Nitin K. Singh, Daniela Bezdan, Aleksandra Checinska Sielaff in BMC Microbiology (2018)

  5. Article

    Open Access

    Genomic characterisation of clinical and environmental Pseudomonas putida group strains and determination of their role in the transfer of antimicrobial resistance genes to Pseudomonas aeruginosa

    Pseudomonas putida is a Gram-negative, non-fermenting bacterium frequently encountered in various environmental niches. P. putida rarely causes disease in humans, though serious infect...

    Silke Peter, Philipp Oberhettinger, Leonard Schuele, Ariane Dinkelacker in BMC Genomics (2017)

  6. Article

    Open Access

    Evidence for the biogenesis of more than 1,000 novel human microRNAs

    MicroRNAs (miRNAs) are established regulators of development, cell identity and disease. Although nearly two thousand human miRNA genes are known and new ones are continuously discovered, no attempt has been m...

    Marc R Friedländer, Esther Lizano, Anna JS Houben, Daniela Bezdan in Genome Biology (2014)