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  1. No Access

    Article

    Improved optimal foraging algorithm for global optimization

    The optimal foraging algorithm (OFA) is a swarm-based algorithm motivated by animal behavioral ecology theory. When solving complex optimization problems characterized by multiple peaks, OFA is easy to get tra...

    Chen Ding, GuangYu Zhu in Computing (2024)

  2. Article

    Open Access

    Pan-cancer analysis combined with experiments predicts NNMT as a therapeutic target for human cancers

    The identification of effective therapeutic targets plays a pivotal role in advancing cancer treatment outcomes. We employed a comprehensive pan-cancer analysis, complemented by experimental validation, to exp...

    Hua Huang, Lianchun Su, Ruihao Zhang, Di Wu, Chen Ding, Chen Chen in Discover Oncology (2024)

  3. No Access

    Article

    A comparative study of locking plate combined with minimally invasive plate osteosynthesis and intramedullary nail fixation in the treatment of Neer classification of two-part and three-part fractures of the proximal humerus

    To compare the clinical efficacy of the minimally invasive locking plate technique (Philos plate) and interlocking intramedullary nailing technique (TRIGEN intramedullary nail) in the treatment of Neer two-par...

    **ang Zhu, Chen Ding, Ya Zhu, Shensheng Nian in European Journal of Orthopaedic Surgery & … (2024)

  4. Article

    Open Access

    Plasma proteome profiling reveals dynamic of cholesterol marker after dual blocker therapy

    Dual blocker therapy (DBT) has the enhanced antitumor benefits than the monotherapy. Yet, few effective biomarkers are developed to monitor the therapy response. Herein, we investigate the DBT longitudinal pla...

    Jiacheng Lyu, Lin Bai, Yumiao Li, **aofang Wang, Zeya Xu, Tao Ji in Nature Communications (2024)

  5. Article

    Open Access

    Does obstructive sleep apnea–induced intermittent hypoxia increase the incidence of solitary pulmonary nodules, thyroid nodules, and other disorders? A retrospective study based on 750 cardiovascular disease patients

    Obstructive sleep apnea (OSA) has been shown to be an important risk factor for cardiovascular disease (CVD), and intermittent hypoxia is an important pathogenetic factor for it. In the clinic, it was found th...

    Chen Ding, Libo Mao, Yinghong Lu, Sai Wu, Wenyan Ji in Sleep and Breathing (2024)

  6. Article

    Open Access

    Identification and analysis of MSC-Exo-derived LncRNAs related to the regulation of EMT in hypospadias

    This study aims to screen the differentially expressed long non-coding RNAs (DELncRNAs) related to the regulation of epithelial-mesenchymal transition (EMT) in hypospadias in mesenchymal stem cell-derived exos...

    Mengmeng Chang, Hongjie Gao, Yingying Li, Chen Ding, Zhiyi Lu in BMC Medical Genomics (2024)

  7. No Access

    Article

    Set7/9 aggravates ischemic brain injury via enhancing glutamine metabolism in a blocking Sirt5 manner

    The aberrant expression of methyltransferase Set7/9 plays a role in various diseases. However, the contribution of Set7/9 in ischemic stroke remains unclear. Here, we show ischemic injury results in a rapid el...

    **ghuan Wang, Subei Tan, Yuyu Zhang, Jie Xu, Yuhui Li in Cell Death & Differentiation (2024)

  8. Article

    Open Access

    Nephroblastoma-specific dysregulated gene SNHG15 with prognostic significance: scRNA-Seq with bulk RNA-Seq data and experimental validation

    Wilms tumor (WT) is the most common malignancy of the genitourinary system in children. Currently, the Integration of single-cell RNA sequencing (scRNA-Seq) and Bulk RNA sequencing (RNA-Seq) analysis of hetero...

    Mengmeng Chang, Ding Li, Li Su, Chen Ding, Zhiyi Lu, Hongjie Gao in Discover Oncology (2024)

  9. Article

    Open Access

    Case study on long-term deformation monitoring and numerical simulation of layered rock slopes on both sides of Wudongde dam reservoir area

    Layered rock slope exists widely. Because of its special slope structure, it is prone to bending deformation and toppling failure, which is a serious threat to engineering construction and safety operation. At...

    Chen Ding, Kaixi Xue, Chaohui Zhou in Scientific Reports (2024)

  10. Article

    Open Access

    Proteomic characterization of esophageal squamous cell carcinoma response to immunotherapy reveals potential therapeutic strategy and predictive biomarkers

    Immunotherapy is the first-line therapy for esophageal squamous cell carcinoma (ESCC), yet many patients do not respond due to drug resistance and the lack of reliable predictive markers. We collected 73 ESCC ...

    Fahan Ma, Yan Li, Chan **ang, Bing Wang, Jie Lv in Journal of Hematology & Oncology (2024)

  11. No Access

    Article

    An Interpretable Screening Approach Derived Through XGBoost Regression for the Discovery of Hypolipidemic Contributors in Chinese Hawthorn Leaf and its Counterfeit Malus Doumeri Leaf

    The active ingredient group is a prominent feature reflecting the inherent characteristics of plant-based functional foods. Chinese hawthorn leaf (CHL), a tea substitute possessing intrinsic nutritional proper...

    Zhen Li, Yuan Du, Chen Ding, Pufan Yang, Lin Wang in Plant Foods for Human Nutrition (2024)

  12. Article

    Open Access

    Proteomic characterization identifies clinically relevant subgroups of soft tissue sarcoma

    Soft tissue sarcoma is a broad family of mesenchymal malignancies exhibiting remarkable histological diversity. We portray the proteomic landscape of 272 soft tissue sarcomas representing 12 major subtypes. Hi...

    Shaoshuai Tang, Yunzhi Wang, Rongkui Luo, Rundong Fang, Yufeng Liu in Nature Communications (2024)

  13. Article

    Open Access

    Longitudinal plasma proteome profiling reveals the diversity of biomarkers for diagnosis and cetuximab therapy response of colorectal cancer

    Cetuximab therapy is the major treatment for colorectal cancer (CRC), but drug resistance limits its effectiveness. Here, we perform longitudinal and deep proteomic profiling of 641 plasma samples originated f...

    Yan Li, Bing Wang, Wentao Yang, Fahan Ma, Jianling Zou, Kai Li in Nature Communications (2024)

  14. Article

    Open Access

    Ribosome profiling: a powerful tool in oncological research

    Neoplastic cells need to adapt their gene expression pattern to survive in an ever-changing or unfavorable tumor microenvironment. Protein synthesis (or mRNA translation), an essential part of gene expression,...

    Dan Su, Chen Ding, Jiangdong Qiu, Gang Yang, Ruobing Wang, Yueze Liu in Biomarker Research (2024)

  15. No Access

    Chapter

    Develo** Tree Improvement Strategies for Challenging Environmental Stresses Under Global Climate Change: A Review from Traditional Tree Breeding to Genomics of Adaptive Traits for the Quaking Aspen

    Quaking or trembling aspen in North America and Euro-Asia (Populus tremuloides and P. tremula, respectively) are both widely distributed species with a long history of scientific research and tree improvement wor...

    Deyu Mu, Chen Ding, Hao Chen, Yang Li, Earl M. (Fred) Raley in The Poplar Genome (2024)

  16. Article

    Dbias: detecting biases and ensuring fairness in news articles

    Because of the increasing use of data-centric systems and algorithms in machine learning, the topic of fairness is receiving a lot of attention in the academic and broader literature. This paper introduces Dbi...

    Shaina Raza, Deepak John Reji, Chen Ding in International Journal of Data Science and … (2024)

  17. Article

    Open Access

    Anterior cervical X-shape-corpectomy and fusion vs. anterior cervical corpectomy and fusion for two-level cervical spondylosis

    Anterior cervical X-shape-corpectomy and fusion (ACXF) is a novel cervical surgery, designed as partial alternative to the classic technique, anterior cervical corpectomy and fusion (ACCF). The aim of this study ...

    Hong Wang, Yang Liu, Tingkui Wu, Chunyi Yan, Junbo He in European Spine Journal (2024)

  18. Article

    Open Access

    Microglia are not protective against cryptococcal meningitis

    Microglia provide protection against a range of brain infections including bacteria, viruses and parasites, but how these glial cells respond to fungal brain infections is poorly understood. We investigated th...

    Sally H. Mohamed, Man Shun Fu, Sofia Hain, Alanoud Alselami in Nature Communications (2023)

  19. No Access

    Article

    6-Methyl flavone inhibits Nogo-B expression and improves high fructose diet-induced liver injury in mice

    Excessive fructose consumption increases hepatic de novo lipogenesis, resulting in cellular stress, inflammation and liver injury. Nogo-B is a resident protein of the endoplasmic reticulum that regulates its s...

    Ke Gong, Zhen Zhang, Sha-sha Chen, **n-ran Zhu, Meng-yao Wang in Acta Pharmacologica Sinica (2023)

  20. Article

    Open Access

    Research on fire resistance and economy of basalt fiber insulation mortar

    The construction sector has become the most critical source of carbon emissions, but the existing thermal insulation materials such as thermal insulation mortar have obvious limitations, so it is urgent to dev...

    Chen Ding, Kaixi Xue, Guangsheng Yi in Scientific Reports (2023)

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