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Article
Open AccessSweet potato viromes in eight different geographical regions in Korea and two different cultivars
The sweet potato in the family Convolvulaceae is a dicotyledonous perennial plant. Here, we conducted a comprehensive sweet potato virome study using 10 different libraries from eight regions in Korea and two dif...
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Article
First report of tomato spotted wilt virus infecting Arachis hypogaea in Korea
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Article
Open AccessBarley RNA viromes in six different geographical regions in Korea
Barley is a kind of cereal grass belonging to the family Poaceae. To examine viruses infecting winter barley in Korea, we carried out a comprehensive study of barley RNA viromes using next-generation sequencing (...
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Article
Complete genome sequence of peanut virus C, a putative novel ilarvirus
We determined the complete genome sequence of a putative novel ilarvirus, tentatively named “peanut virus C” (PVC), identified in peanut (Arachis hypogaea). The three segmented genomic RNA molecules of PVC were 3...
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Article
Open AccessPeach RNA viromes in six different peach cultivars
Many recent studies have demonstrated that several known and unknown viruses infect many horticultural plants. However, the elucidation of a viral population and the understanding of the genetic complexity of ...
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Article
Complete genome sequence of rice virus A, a new member of the family Tombusviridae
An evaluation of the virus population in rice plants using next-generation sequencing technologies resulted in the discovery of a new RNA virus, tentatively named rice virus A (RVA). The complete RVA genome se...
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Article
Open AccessThe pepper virome: natural co-infection of diverse viruses and their quasispecies
The co-infection of diverse viruses in a host plant is common; however, little is known about viral populations and their quasispecies in the host.
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Article
Comprehensive analysis of genomic variation of Hop stunt viroid
Hop stunt viroid (HSVd) infects a wide range of plants. In this study, we assembled de novo two HSVd genomes from the transcriptome of an apricot species. To examine HSVd variation in a s...
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Article
Open AccessIntegrated analyses using RNA-Seq data reveal viral genomes, single nucleotide variations, the phylogenetic relationship, and recombination for Apple stem grooving virus
Next-generation sequencing (NGS) provides many possibilities for plant virology research. In this study, we performed integrated analyses using plant transcriptome data for plant virus identification using Apple ...
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Article
The complete genomic sequence of a tentative new polerovirus identified in barley in South Korea
The complete nucleotide sequence of a new barley polerovirus, tentatively named barley virus G (BVG), which was isolated in Gimje, South Korea, has been determined using an RNA sequencing technique combined wi...
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Article
A nationwide survey and genetic analysis of rice stripe virus in South Korea during 2012–2013
Rice stripe virus (RSV) is a major rice-infecting virus in Korea that has caused a severe resurgence in the western provinces in 2007–2008. The outbreak of RSV in rice was caused by the small brown planthopper La...
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Article
Fine map** of GRH3 conferring resistance to green rice leafhopper in rice (Oryza sativa L.)
Green rice leafhopper (GRH) is a major sap-sucking insect pest that causes large annual yield losses in rice by transmitting the rice dwarf virus or spreading sooty mold fungi. Genetic resistance is the most ...
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Article
Suppression of NS3 and MP is important for the stable inheritance of RNAi-mediated Rice Stripe Virus (RSV) resistance obtained by targeting the fully complementary RSV-CP gene
Rice stripe virus (RSV) is a viral disease that seriously impacts rice production in East Asia, most notably in Korea, China, and Japan. Highly RSV-resistant transgenic japonica rice plants were ...
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Protocol
Reovirus Isolation and RNA Extraction
Plant reoviruses are classified in three genera in the family Reoviridae: Phytoreovirus, Fijivirus, and Oryzavirus. Fifteen viruses, including possible members, are described (1). With two exceptions, all of them...
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Article
Somatic embryogenesis and plant regeneration in Quercus acutissima
Immature embryos of Quercus acutissima were collected weekly beginning 5 weeks post-fertilization and cultured on modified MS(Murashige and Skoog) medium containing 1,000 mg/l glutamine and 5 mM proline with diff...
