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  1. Article

    Open Access

    Quantitative proteome profiling reveals molecular hallmarks of egg quality in Atlantic halibut: impairments of transcription and protein folding impede protein and energy homeostasis during early development

    Tandem mass tag spectrometry (TMT labeling-LC-MS/MS) was utilized to examine the global proteomes of Atlantic halibut eggs at the 1-cell-stage post fertilization. Comparisons were made between eggs judged to b...

    Ozlem Yilmaz, Anders Mangor Jensen, Torstein Harboe, Margareth Møgster in BMC Genomics (2022)

  2. Article

    Open Access

    Single nucleotide replacement in the Atlantic salmon genome using CRISPR/Cas9 and asymmetrical oligonucleotide donors

    New breeding technologies (NBT) using CRISPR/Cas9-induced homology directed repair (HDR) has the potential to expedite genetic improvement in aquaculture. The long generation time in Atlantic salmon makes bree...

    Anne Hege Straume, Erik Kjærner-Semb, Kai Ove Skaftnesmo, Hilal Güralp in BMC Genomics (2021)

  3. Article

    Open Access

    Targeted mutagenesis of ∆5 and ∆6 fatty acyl desaturases induce dysregulation of lipid metabolism in Atlantic salmon (Salmo salar)

    With declining wild fish populations, farmed salmon has gained popularity as a source for healthy long-chain highly unsaturated fatty acids (LC-HUFA). However, the introduction of plant oil in farmed salmon fe...

    Yang **, Alex K. Datsomor, Rolf E. Olsen, Jon Olav Vik, Jacob S. Torgersen in BMC Genomics (2020)

  4. Article

    Open Access

    Development of supermale and all-male Atlantic salmon to research the vgll3 allele - puberty link

    Farmed Atlantic salmon are one of the most economically significant global aquaculture products. Early sexual maturation of farmed males represents a significant challenge to this industry and has been linked ...

    Per Gunnar Fjelldal, Tom J. Hansen, Anna Wargelius, Fernando Ayllon in BMC Genetics (2020)

  5. Article

    Open Access

    Transcriptomic analysis of dead end knockout testis reveals germ cell and gonadal somatic factors in Atlantic salmon

    Sustainability challenges are currently hampering an increase in salmon production. Using sterile salmon can solve problems with precocious puberty and genetic introgression from farmed escapees to wild popula...

    Lene Kleppe, Rolf Brudvik Edvardsen, Tomasz Furmanek, Eva Andersson in BMC Genomics (2020)

  6. No Access

    Article

    Application of genome editing in aquatic farm animals: Atlantic salmon

    Gene editing offers opportunities to solve fish farming sustainability issues that presently hampers expansion of the aquaculture industry. In for example Atlantic salmon farming, there are now two major bottl...

    Anna Wargelius in Transgenic Research (2019)

  7. Article

    Open Access

    The influence of vgll3 genotypes on sea age at maturity is altered in farmed mowi strain Atlantic salmon

    In Atlantic salmon in the wild, age at maturity is strongly influenced by the vgll3 locus. Under farming conditions, light, temperature and feeding regimes are known significantly advance or delay age at maturity...

    Fernando Ayllon, Monica F. Solberg, Kevin A. Glover, Faezeh Mohammadi in BMC Genetics (2019)

  8. Article

    Open Access

    Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture

    We describe an emerging initiative - the ‘Functional Annotation of All Salmonid Genomes’ (FAASG), which will leverage the extensive trait diversity that has evolved since a whole genome duplication event in th...

    Daniel J. Macqueen, Craig R. Primmer, Ross D. Houston, Barbara F. Nowak in BMC Genomics (2017)

  9. Article

    Open Access

    Atlantic salmon populations reveal adaptive divergence of immune related genes - a duplicated genome under selection

    Populations of Atlantic salmon display highly significant genetic differences with unresolved molecular basis. These differences may result from separate postglacial colonization patterns, diversifying natural...

    Erik Kjærner-Semb, Fernando Ayllon, Tomasz Furmanek, Vidar Wennevik in BMC Genomics (2016)

  10. Article

    Open Access

    Transcriptome sequencing of Atlantic salmon (Salmo salar L.) notochord prior to development of the vertebrae provides clues to regulation of positional fate, chordoblast lineage and mineralisation

    In teleosts such as Atlantic salmon (Salmo salar L.), segmentation and subsequent mineralisation of the notochord during embryonic stages are essential for normal vertebrae formation. However, the molecular mecha...

    Shou Wang, Tomasz Furmanek, Harald Kryvi, Christel Krossøy, Geir K Totland in BMC Genomics (2014)

  11. Article

    Open Access

    Maternal 3’UTRs: from egg to onset of zygotic transcription in Atlantic cod

    Zygotic transcription in fish embryos initiates around the time of gastrulation, and all prior development is initiated and controlled by maternally derived messenger RNAs. Atlantic cod egg and embryo viabilit...

    Lene Kleppe, Rolf B Edvardsen, Heiner Kuhl, Ketil Malde, Tomasz Furmanek in BMC Genomics (2012)

  12. No Access

    Article

    Heat shock during early somitogenesis induces caudal vertebral column defects in Atlantic salmon (Salmo salar)

    In several terrestrial vertebrates, heat shock (HS) during somitogenesis causes vertebral deformities. To determine if vertebral deformities can occur due to sudden temperature changes during early development...

    Anna Wargelius, Per Gunnar Fjelldal, Tom Hansen in Development Genes and Evolution (2005)