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Protocol
Allelic Imbalance Assays to Quantify Allele-Specific Gene Expression and Transcription Factor Binding
A growing number of noncoding variants are found to influence the susceptibility to common diseases and interindividual variation in drug response. However, the mechanisms by which noncoding variation affects ...
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Article
A signature of balancing selection in the region upstream to the human UGT2B4 gene and implications for breast cancer risk
UDP-glucuronosyltransferase 2 family, polypeptide B4 (UGT2B4) is an important metabolizing enzyme involved in the clearance of many xenobiotics and endogenous substrates, especially steroid hormones and bile a...
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Article
Adaptation – not by sweeps alone
There has been recent progress in identifying selective sweeps underlying a range of adaptations. Jonathan Pritchard and Anna Di Rienzo argue that many adaptive events in natural populations may occur by polyg...
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Article
Spatial patterns of variation due to natural selection in humans
Marked geographic patterns for the distribution of some heritable traits are observed in humans, including traits related to disease risk, pathogen resistance ...
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Article
Functional constraints on the constitutive androstane receptor inferred from human sequence variation and cross-species comparisons
Members of the NR1I subfamily of nuclear receptors play a role in the transcriptional activation of genes involved in drug metabolism and transport. NR1I3, the constitutive androstane receptor (CAR), mediates ...
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Article
Haplotype structure and phylogenetic shadowing of a hypervariable region in the CAPN10 gene
It has been proposed that variation in calpain 10 (CAPN10) contributes to the risk of type 2 diabetes (T2D). A previous survey of CAPN10 in ethnically diverse populations revealed an intronic region with a signif...
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Protocol
Amplification with Arbitrary Primers
Several methods have been published that rely on the use of short oligonucleotide primers with arbitrary sequences to amplify discrete DNA fragments by the polymerase chain reaction (PCR) (1,2). Typically, a sing...
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Article
Molecular characterization of HbH disease in the Cuban population
Molecular characterization of the α-thalassemia mutations present in nine HbH subjects from Cuba was achieved by digestion with Bam HI, Bgl II, and Apa I and hybridization with α- and ζ-specific probes. The re...
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Article
Frequency and types of deletional α+ in Northern Sardinia
We determined by restriction map** the frequency of the −α3.7 determinant in a random sample of 48 adults in Northern Sardinia. We found a frequency of 0.18±0.04 and demonstrated that only type I crossover as d...