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    Article

    Early-life prefrontal cortex inhibition and early-life stress lead to long-lasting behavioral, transcriptional, and physiological impairments

    Early-life stress has been linked to multiple neurodevelopmental and neuropsychiatric deficits. Our previous studies have linked maternal presence/absence from the nest in develo** rat pups to changes in pre...

    Edênia C. Menezes, Heather Geiger, Fabiula F. Abreu, Lital Rachmany in Molecular Psychiatry (2024)

  2. Article

    Open Access

    A translational genomics approach identifies IL10RB as the top candidate gene target for COVID-19 susceptibility

    Recent efforts have identified genetic loci that are associated with coronavirus disease 2019 (COVID-19) infection rates and disease outcome severity. Translating these genetic findings into druggable genes th...

    Georgios Voloudakis, James M. Vicari, Sanan Venkatesh in npj Genomic Medicine (2022)

  3. Article

    Open Access

    Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

    Coronavirus disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection, has been associated with neurological and neuropsychiatric illness in many individuals. We...

    John F. Fullard, Hao-Chih Lee, Georgios Voloudakis, Shengbao Suo in Genome Medicine (2021)

  4. Article

    Open Access

    Author Correction: Dense sampling of bird diversity increases power of comparative genomics

    A Correction to this paper has been published: https://doi.org/10.1038/s41586-021-03473-8.

    Shaohong Feng, Josefin Stiller, Yuan Deng, Joel Armstrong, Qi Fang in Nature (2021)

  5. Article

    Open Access

    Sequencing of 53,831 diverse genomes from the NHLBI TOPMed Program

    The Trans-Omics for Precision Medicine (TOPMed) programme seeks to elucidate the genetic architecture and biology of heart, lung, blood and sleep disorders, with the ultimate goal of improving diagnosis, treat...

    Daniel Taliun, Daniel N. Harris, Michael D. Kessler, Jedidiah Carlson in Nature (2021)

  6. Article

    Open Access

    Massive gene presence-absence variation shapes an open pan-genome in the Mediterranean mussel

    The Mediterranean mussel Mytilus galloprovincialis is an ecologically and economically relevant edible marine bivalve, highly invasive and resilient to biotic and abiotic stressors causing recurrent massive morta...

    Marco Gerdol, Rebeca Moreira, Fernando Cruz, Jessica Gómez-Garrido in Genome Biology (2020)

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    Article

    Dense sampling of bird diversity increases power of comparative genomics

    Whole-genome sequencing projects are increasingly populating the tree of life and characterizing biodiversity14. Sparse taxon sampling has previously been proposed to confound phylogenetic inference5, and captur...

    Shaohong Feng, Josefin Stiller, Yuan Deng, Joel Armstrong, Qi Fang in Nature (2020)

  8. Article

    Open Access

    Genome-wide somatic variant calling using localized colored de Bruijn graphs

    Reliable detection of somatic variations is of critical importance in cancer research. Here we present Lancet, an accurate and sensitive somatic variant caller, which detects SNVs and indels by jointly analyzi...

    Giuseppe Narzisi, André Corvelo, Kanika Arora, Ewa A. Bergmann in Communications Biology (2018)

  9. Article

    Open Access

    Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx

    Genomic studies of endangered species provide insights into their evolution and demographic history, reveal patterns of genomic erosion that might limit their viability, and offer tools for their effective con...

    Federico Abascal, André Corvelo, Fernando Cruz, José L. Villanueva-Cañas in Genome Biology (2016)

  10. Article

    Open Access

    Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes

    Legumes are the third largest family of angiosperms and the second most important crop class. Legume genomes have been shaped by extensive large-scale gene duplications, including an approximately 58 million y...

    Anna Vlasova, Salvador Capella-Gutiérrez, Martha Rendón-Anaya in Genome Biology (2016)

  11. Article

    Open Access

    Overexpression of Reelin Prevents the Manifestation of Behavioral Phenotypes Related to Schizophrenia and Bipolar Disorder

    Despite the impact of schizophrenia and mood disorders, which in extreme cases can lead to death, recent decades have brought little progress in the development of new treatments. Recent studies have shown tha...

    Cátia M Teixeira, Eduardo D Martín, Ignasi Sahún, Nuria Masachs in Neuropsychopharmacology (2011)

  12. Article

    Open Access

    Exon creation and establishment in human genes

    A large proportion of species-specific exons are alternatively spliced. In primates, Alu elements play a crucial role in the process of exon creation but many new exons have appeared through other mechanisms. Des...

    André Corvelo, Eduardo Eyras in Genome Biology (2008)