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  1. Article

    Open Access

    SEEI: spherical evolution with feedback mechanism for identifying epistatic interactions

    Detecting epistatic interactions (EIs) involves the exploration of associations among single nucleotide polymorphisms (SNPs) and complex diseases, which is an important task in genome-wide association studies....

    De-yu Tang, Yi-jun Mao, Jie Zhao, ** Yang, Shi-yin Li, Fu-xiang Ren in BMC Genomics (2024)

  2. Article

    Open Access

    Manufacturing, quality control, and GLP-grade preclinical study of nebulized allogenic adipose mesenchymal stromal cells-derived extracellular vesicles

    Human adipose stromal cells-derived extracellular vesicles (haMSC-EVs) have been shown to alleviate inflammation in acute lung injury (ALI) animal models. However, there are few systemic studies on clinical-gr...

    **g Wang, Zhong-** Chen, Ze-yi Zhang, Mei-** Shen in Stem Cell Research & Therapy (2024)

  3. Article

    Open Access

    Lactobacillus rhamnosus GG ameliorates hyperuricemia in a novel model

    Hyperuricemia (HUA) is a metabolic syndrome caused by abnormal purine metabolism. Although recent studies have noted a relationship between the gut microbiota and gout, whether the microbiota could ameliorate ...

    Yang Fu, Yong-Song Chen, Dai-Yang **a, **ao-Dan Luo in npj Biofilms and Microbiomes (2024)

  4. No Access

    Article

    Initial Upper Palaeolithic material culture by 45,000 years ago at Shiyu in northern China

    The geographic expansion of Homo sapiens populations into southeastern Europe occurred by ∼47,000 years ago (∼47 ka), marked by Initial Upper Palaeolithic (IUP) technology. H. sapiens was present in western Siber...

    Shi-**a Yang, Jia-Fu Zhang, Jian-** Yue, Rachel Wood in Nature Ecology & Evolution (2024)

  5. Article

    Open Access

    Lipid parameters, adipose tissue distribution and prognosis prediction in chronic kidney Disease patients

    Lipid management in clinic is critical to the prevention and treatment of Chronic kidney disease (CKD), while the manifestations of lipid indicators vary in types and have flexible association with CKD prognosis.

    Hui-fen Chen, Bing-jie **ao, Lin-yi Chen, Wen-wei OuYang in Lipids in Health and Disease (2024)

  6. Article

    Open Access

    BRISC is required for optimal activation of NF-κB in Kupffer cells induced by LPS and contributes to acute liver injury

    BRISC (BRCC3 isopeptidase complex) is a deubiquitinating enzyme that has been linked with inflammatory processes, but its role in liver diseases and the underlying mechanism are unknown. Here, we investigated ...

    Wen Zhang, Kai Liu, Guang-Ming Ren, Yu Wang, Ting Wang, **an Liu in Cell Death & Disease (2023)

  7. Article

    Open Access

    Coffee as a dietary strategy to prevent SARS-CoV-2 infection

    To date, most countries lifted the restriction requirement and coexisted with SARS-CoV-2. Thus, dietary behavior for preventing SARS-CoV-2 infection becomes an interesting issue on a daily basis. Coffee consum...

    Chen-Shiou Wu, Yi-Chuan Li, Shin-Lei Peng, Chung-Yu Chen in Cell & Bioscience (2023)

  8. Article

    Open Access

    Phagotrophic protists preserve antibiotic-resistant opportunistic human pathogens in the vegetable phyllosphere

    Food safety of leafy greens is an emerging public health issue as they can harbor opportunistic human pathogens (OHPs) and expose OHPs to consumers. Protists are an integral part of phyllosphere microbial ecos...

    Chenshuo Lin, Li-Juan Li, Kexin Ren, Shu-Yi-Dan Zhou, Alain Isabwe in ISME Communications (2023)

  9. Article

    Open Access

    GSKIP modulates cell aggregation through EMT/MET signaling rather than differentiation in SH-SY5Y human neuroblastoma cells

    GSK3β interacting protein (GSKIP) is a small A-kinase anchor protein previously reported to mediate the N-cadherin/β-catenin pool for differentiation in SH-SY5Y cells through overexpression of GSKIP to present...

    Cheng-Yu Tsai, Huey-Jiun Ko, Shean-Jaw Chiou in Journal of Cell Communication and Signaling (2023)

  10. No Access

    Article

    In vitro screening of native rhizobacteria and selection of Bacillus atrophaeus for the biocontrol of pepper root rot in the Gansu Province, China

    The aim of the present study was to screen native cultivable rhizobacteria with potential applications for biocontrol of root rot, which results in a serious and persistent disease problem for the pepper indus...

    Sheng-Jun Xu, **-Kui Zhang, Rui-Ning Hou, Zhuo-Qiong **g in Tropical Plant Pathology (2023)

  11. Article

    Open Access

    Repurposing thioridazine for inducing immunogenic cell death in colorectal cancer via eIF2α/ATF4/CHOP and secretory autophagy pathways

    Colorectal cancer (CRC) is a highly prevalent cancer type with limited targeted therapies available and 5-year survival rate, particularly for late-stage patients. There have been numerous attempts to repurpos...

    Thu-Ha Tran, Ming Kao, Hsiao-Sheng Liu, Yi-Ren Hong in Cell Communication and Signaling (2023)

  12. Article

    Open Access

    HucMSC-EVs Facilitate In Vitro Development of Maternally Aged Preantral Follicles and Oocytes

    Follicle developmental capacity and oocyte quality decline with advanced maternal age. Extracellular vesicles from human umbilical cord mesenchymal stem cells (HucMSC-EVs) act as a potential therapeutic produc...

    Ying-Yi Zhang, Weijie Yang, Yi Zhang, Zhanhong Hu in Stem Cell Reviews and Reports (2023)

  13. Article

    Open Access

    Phylogeography of cultivated and wild ophiopogon japonicus based on chloroplast DNA: exploration of the origin and sustainable cultivation

    Ophiopogon japonicus, mainly planted in Sichuan (CMD) and Zhejiang (ZMD) province in China, has a lengthy cultivation history. During the long period of domestication, the genetic diversity of cultivated O. japon...

    Lu-ying Zhao, Yu-ling Liu, Yi Shen, Qiao-yan Zhang, Sha Liu in BMC Plant Biology (2023)

  14. Article

    Open Access

    LCRMP-1 is required for spermatogenesis and stabilises spermatid F-actin organization via the PI3K-Akt pathway

    Long-form collapsin response mediator protein-1 (LCRMP-1) belongs to the CRMP family which comprises brain-enriched proteins responsible for axon guidance. However, its role in spermatogenesis remains unclear....

    Jung-Hsuan Chang, Chia-Hua Chou, Jui-Ching Wu, Keng-Mao Liao in Communications Biology (2023)

  15. Article

    Open Access

    BMX, a specific HDAC8 inhibitor, with TMZ for advanced CRC therapy: a novel synergic effect to elicit p53-, β-catenin- and MGMT-dependent apoptotic cell death

    Despite advances in treatment, patients with refractory colorectal cancer (CRC) still have poor long-term survival, so there is a need for more effective therapeutic options.

    Huey-Jiun Ko, Shean-Jaw Chiou, Cheng-Yu Tsai in Cell Communication and Signaling (2022)

  16. Article

    Open Access

    OrchidBase 5.0: updates of the orchid genome knowledgebase

    Containing the largest number of species, the orchid family provides not only materials for studying plant evolution and environmental adaptation, but economically and culturally important ornamental plants fo...

    You-Yi Chen, Chung‐I Li, Yu-Yun Hsiao, Sau-Yee Ho, Zhe-Bin Zhang in BMC Plant Biology (2022)

  17. Article

    Open Access

    Targeting UHRF1-SAP30-MXD4 axis for leukemia initiating cell eradication in myeloid leukemia

    Aberrant self-renewal of leukemia initiation cells (LICs) drives aggressive acute myeloid leukemia (AML). Here, we report that UHRF1, an epigenetic regulator that recruits DNMT1 to methylate DNA, is highly exp...

    Cheng-Long Hu, Bing-Yi Chen, Zijuan Li, Tianbiao Yang, Chun-Hui Xu in Cell Research (2022)

  18. Article

    Open Access

    Aloe polysaccharide promotes osteogenesis potential of adipose-derived stromal cells via BMP-2/Smads and prevents ovariectomized-induced osteoporosis

    Aloe polysaccharide (AP) is a type of an active macromolecule of Aloe vera, which contributes to its function. However, whether AP possesses anti-osteoporosis properties is unknown.

    Xue-wei Yao, He-dong Liu, Mao-xian Ren, Tian-lin Li in Molecular Biology Reports (2022)

  19. No Access

    Article

    The spectrin cytoskeleton integrates endothelial mechanoresponses

    Physiological blood flow induces the secretion of vasoactive compounds, notably nitric oxide, and promotes endothelial cell elongation and reorientation parallel to the direction of applied shear. How shear is...

    Sivakami Mylvaganam, Jonathan Plumb, Bushra Yusuf, Ren Li in Nature Cell Biology (2022)

  20. Article

    Open Access

    CoVac501, a self-adjuvanting peptide vaccine conjugated with TLR7 agonists, against SARS-CoV-2 induces protective immunity

    Safe, effective, and economical vaccines against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) are needed to achieve adequate herd immunity and end the pandemic. We constructed a novel SARS-CoV-...

    Yiru Long, Jianhua Sun, Tian-Zhang Song, Tingting Liu, Feng Tang in Cell Discovery (2022)

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