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  1. No Access

    Protocol

    Structure-Guided and Phage-Assisted Evolution of Therapeutic Antibodies to Reverse On-Target Point Mutation-Mediated Resistance

    Resistance to therapeutic antibodies caused by on-target point mutations is a major obstacle in anticancer therapy, creating an “unmet clinical need.” To tackle this problem, researchers are develo** new gen...

    **nlei Zhuang, Shuqing Chen, Liqiang Pan in Phage Engineering and Analysis (2024)

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    Protocol

    Preparation of Bioconjugates of Chimeric M13 Phage and Gold Nanorods

    Phage-nanomaterial conjugates are functional bio-nanofibers with various applications. While phage display can select for phages with desired genetically encoded functions and properties, nanomaterials can end...

    Huan Peng, Irene A. Chen in Phage Engineering and Analysis (2024)

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    Protocol

    Enzymatic Preparation of DNA with an Expanded Genetic Alphabet Using Terminal Deoxynucleotidyl Transferase and Its Applications

    Efficient preparation of DNA oligonucleotides containing unnatural nucleobases (UBs) that can pair with their cognates to form unnatural base pairs (UBPs) is an essential prerequisite for the application of UB...

    Guangyuan Wang, Yuhui Du, Tingjian Chen in Synthetic Biology (2024)

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    Protocol

    Visualization of Engineered M13 Phages Bound to Bacterial Targets by Transmission Electron Microscopy

    The filamentous phage M13 is one of the most well-studied and characterized phages, particularly since it was introduced as a scaffold for phage display, a technique to express and evolve fusion proteins on th...

    Yanxi Yang, Irene A. Chen in Phage Engineering and Analysis (2024)

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    Protocol

    Generation and Characterization of In Vitro Transcribed mRNA

    Here we describe the in vitro preparation of mRNA from DNA templates, including setting up the transcription reaction, mRNA cap**, and mRNA labeling. We then describe methods used for mRNA characterization, ...

    Cristina Poveda, Yi-Lin Chen, Ulrich Strych in RNA Vaccines (2024)

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    Protocol

    Construction of Xylose-Utilizing Cyanobacterial Chassis for Bioproduction Under Photomixotrophic Conditions

    Xylose is a major component of lignocellulose and the second most abundant sugar present in nature after glucose; it, therefore, has been considered to be a promising renewable resource for the production of b...

    **nyu Song, Yue Ju, Lei Chen, Weiwen Zhang in Synthetic Biology (2024)

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    Protocol

    Scalable Liposome Synthesis by High Aspect Ratio Microfluidic Flow Focusing

    Microfluidic flow focusing provides an efficient approach to the generation of nanoscale lipid vesicles of tunable size and low size variance. Scalable nanoliposome synthesis over a wide range of production ra...

    Jung Yeon Han, Zhu Chen, Don L. Devoe in Liposomes (2023)

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    Protocol

    Lateral Filter Array Microfluidic Devices for Detecting Circulating Tumor Cells

    Circulating tumor cells (CTCs) are an important liquid biopsy biomarker for next-generation cancer diagnosis and prognosis. However, their clinical usage is hindered by the rarity of CTCs in patient’s peripher...

    Kangfu Chen, Thomas J. George, Z. Hugh Fan in Microfluidic Systems for Cancer Diagnosis (2023)

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    Protocol

    Single-Cell Micropatterning by Non-fouling Hydrogels

    Micropatterned substrate is a unique method for studying cell biology at the single-cell level. Using photolithography to create binary patterns of cell-adherent peptide surrounding by non-fouling cell-repelle...

    Wengang Liu, Ting-Hsuan Chen, Jiandong Ding in Single-Cell Assays (2023)

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    Protocol

    High-Throughput Separation and Enrichment of Rare Malignant Tumor Cells from Large-Volume Effusions by Inertial Microfluidics

    Detection of malignant tumor cells (MTCs) in pleural effusions is essential for determining the malignancy. However, the sensitivity of MTC detection is significantly decreased due to the existence of a massiv...

    Chen Ni, Zhixian Zhu, Zheng Zhou, Nan **ang in Microfluidic Systems for Cancer Diagnosis (2023)

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    Protocol

    Preparation of Doxorubicin Liposomes by Remote Loading Method

    Doxorubicin liposome is one of the most important nano-drug formulations. DOXIL, the first FDA-approved doxorubicin liposomes, is also the first nano-drug product in market. Since it was approved in 1995, DOXI...

    Jian Chen in Liposomes (2023)

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    Protocol

    Microfluidics-Enabled Isolation and Single-Cell Analysis of Circulating Tumor Cells

    Microfluidic platforms enable the enrichment and analysis of circulating tumor cells (CTCs), a potential biomarker for cancer diagnosis, prognosis, and theragnosis. Combined with immunocytochemistry/immunofluo...

    Minh-Chau N. Le, Kierstin A. Smith, Morteza Alipanah, Kangfu Chen in Single-Cell Assays (2023)

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    Protocol

    In Vitro 3D Mechanical Stimulation to Tendon-Derived Stem Cells by Bioreactor

    Bioreactors can offer an advanced platform to provide conditions that mimic the native microenvironment, which can also provide stretching environment for mechanobiology research. Tendon-derived stem cells (TD...

    Ziming Chen, Peilin Chen, Rui Ruan, Minghao Zheng in Bioreactors in Stem Cell Biology (2022)

  14. No Access

    Protocol

    Mobile ELISA with a Transparent Incubator

    Enzyme-linked immunosorbent assay (ELISA) is one of the most important technologies for biochemical testing critical for diagnosis and monitoring of many diseases. Traditional systems for ELISA incubation and ...

    Arsenii Zhdanov, Cassidy Chen, Crystal Schmitt in Biomedical Engineering Technologies (2022)

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    Protocol

    Methods to Measure the Inhibition of ABCG2 Transporter and Ferrochelatase Activity to Enhance Aminolevulinic Acid-Protoporphyrin IX Fluorescence-Guided Tumor Detection and Resection

    Aminolevulinic acid (ALA) has been clinically used as an intraoperative fluorescence probe for protoporphyrin IX (PpIX) fluorescence-guided tumor resection and a PDT agent for cancer treatment. Although tumor ...

    Matthew Mansi, Richard Howley, Bin Chen in Biomedical Engineering Technologies (2022)

  16. No Access

    Protocol

    Wireless Wearable Ultrasound Sensor to Characterize Respiratory Behavior

    A wireless wearable sensor on a paper substrate was used to continuously monitor respiratory behavior that can extract and deliver clinically relevant respiratory parameters to a smartphone. Intended to be pla...

    Ang Chen, Rachel Diane Rhoades, Andrew Joshua Halton in Biomedical Engineering Technologies (2022)

  17. No Access

    Protocol

    Extracellular Vesicle Collection from Human Stem Cells Grown in Suspension Bioreactors

    Extracellular vesicles (EVs) are particles with 100–1000 nm sizes which are secreted by cells for intercellular communication. Meanwhile, studies have found that EVs secreted by human stem cells carry similar ...

    Xuegang Yuan, **ngchi Chen, Changchun Zeng in Bioreactors in Stem Cell Biology (2022)

  18. No Access

    Protocol

    Designing Overlap Extension PCR Primers for Protein Mutagenesis: A Programmatic Approach

    Overlap extension PCR is one of the routinely used methods to generate mutagenic genes for the functional and structural study of proteins. However, it is time-consuming to design the overlap** mutagenic pri...

    **aofang Huang, Liangting Xu, Chuyun Bi, Lili Zhao, Limei Zhang in Directed Evolution (2022)

  19. No Access

    Protocol

    Focused Ultrasound-Mediated Intranasal Brain Drug Delivery Technique (FUSIN)

    The blood–brain barrier (BBB) is the major barrier for brain drug delivery and limits the treatment options for central nervous system diseases. To circumvent the BBB, we introduced the focused ultrasound-medi...

    Dezhuang Ye, Hong Chen in Biomedical Engineering Technologies (2022)

  20. No Access

    Protocol

    Site-Directed Mutagenesis Method Mediated by Cas9

    This study presents an in vitro CRISPR/Cas9-mediated mutagenic (ICM) system that allows rapid construction of designed mutants or site-saturation mutagenesis libraries in a PCR-independent manner. The plasmid ...

    Wan** Chen, Wenwen She, Aitao Li, Chao Zhai, Lixin Ma in Directed Evolution (2022)

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