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  1. Quantitative Analysis of Nucleoside Triphosphate Pools in Mouse Muscle Using Hydrophilic Interaction Liquid Chromatography Coupled with Tandem Mass Spectrometry Detection

    Defects in deoxyribonucleoside triphosphate (dNTP) metabolism are associated with a number of mitochondrial DNA (mtDNA) depletion syndromes (MDS)....
    Sushma Sharma, Ziqing Kong, ... Andrei Chabes in Mitochondrial DNA
    Protocol 2023
  2. Comparison of reversed-phase, hydrophilic interaction, and porous graphitic carbon chromatography columns for an untargeted toxicometabolomics study in pooled human liver microsomes, rat urine, and rat plasma

    Introduction

    Untargeted metabolomics studies are expected to cover a wide range of compound classes with high chemical diversity and complexity. Thus,...

    Selina Hemmer, Sascha K. Manier, ... Markus R. Meyer in Metabolomics
    Article Open access 30 April 2024
  3. Liquid Chromatography and Capillary Electrophoresis Analysis of 2AA-Labeled O-Glycans

    To reveal O-glycan structures in mucins, it is necessary to release covalently bound O-glycans from the polypeptide backbone and derivatize to a form...
    Keita Yamada in Mucins
    Protocol 2024
  4. Chromatography

    This chapter covers the principle, working, and operations of different types of chromatographic techniques like paper, thin layer, column...
    Kamal Gandhi, Neelima Sharma, ... Vanita Pandey in Advanced Analytical Techniques in Dairy Chemistry
    Protocol 2022
  5. Type I Lipoteichoic Acid (LTA) Purification by Hydrophobic Interaction Chromatography and Structural Analysis by 2D Nuclear Magnetic Resonance (NMR) Spectroscopy

    Type I lipoteichoic acid (LTA) is a glycerol phosphate polymer found in the cell envelope of diverse Gram-positive bacteria. The glycerol phosphate...
    Jeanine Rismondo, Angelika Gründling in The Bacterial Cell Wall
    Protocol 2024
  6. Application of Liquid Chromatography for the Analysis of Flavonoids in Food: An Overview

    Flavonoids are a known group of organic compounds found in plants, where they act as dyes and natural fungicides. Together with the food of plant...
    Chapter 2021
  7. Liquid Chromatography-Mass Spectrometry for Clinical Metabolomics: An Overview

    Metabolomics is a discipline that offers a comprehensive analysis of metabolites in biological samples. In the last decades, the notable evolution in...
    Izadora L. Furlani, Estéfane da Cruz Nunes, ... Regina V. Oliveira in Separation Techniques Applied to Omics Sciences
    Chapter 2021
  8. Liquid–liquid phase separation of H3K27me3 reader BP1 regulates transcriptional repression

    Background

    Bromo-adjacent homology-plant homeodomain domain containing protein 1 (BP1) is a reader of histone post-translational modifications in...

    Guangfei Tang, Haoxue **a, ... Wende Liu in Genome Biology
    Article Open access 11 March 2024
  9. Utilizing Skyline to analyze lipidomics data containing liquid chromatography, ion mobility spectrometry and mass spectrometry dimensions

    Lipidomics studies suffer from analytical and annotation challenges because of the great structural similarity of many of the lipid species. To...

    Kaylie I. Kirkwood, Brian S. Pratt, ... Erin S. Baker in Nature Protocols
    Article 13 July 2022
  10. Ultra-high-performance liquid chromatography high-resolution mass spectrometry variants for metabolomics research

    Ultra-high-performance liquid chromatography high-resolution mass spectrometry (UHPLC–HRMS) variants currently represent the best tools to tackle the...

    Leonardo Perez de Souza, Saleh Alseekh, ... Alisdair R. Fernie in Nature Methods
    Article 10 May 2021
  11. Adhesion-related properties of silver birch (Betula Pendula Roth) wood as affected by hydrophilic extraction

    For the utilization of silver birch ( Betula pendula R oth ) in load-bearing engineered wood products (EWPs), reliable bonding in production is a...

    Max Engelhardt, Hans Albert Gilg, ... Antoni Sanchez-Ferrer in Wood Science and Technology
    Article Open access 07 January 2024
  12. Untargeted Analysis of Short-Chain Peptides in Urine Samples Short Peptides Analysis

    Short-chain peptides have attracted increasing attention in different research fields, including biomarker discovery, but also a well-known...
    SaraElsa Aita, Andrea Cerrato, ... Anna Laura Capriotti in Systems Biology
    Protocol 2024
  13. 9-Fluorenylmethyl Chloroformate Labeling for O-Glycan Analysis

    Structural analysis of O-glycans from mucins and characterization of the interaction of these glycans with other biomolecules are essential for a...
    Keita Yamada in Mucins
    Protocol 2024
  14. Advanced analysis of oligomeric proanthocyanidins: latest approaches in liquid chromatography and mass spectrometry based analysis

    Proanthocyanidins (PAC) are an important and widely spread class of natural products with various bioactivities. The analytical evaluation of...

    Nico Symma, Andreas Hensel in Phytochemistry Reviews
    Article Open access 24 June 2021
  15. A High-Throughput HILIC-MS-Based Metabolomic Assay for the Analysis of Polar Metabolites

    Mass spectrometry (MS)-based metabolomics approaches have been used for characterizing the metabolite content and composition of biological samples...
    Giuseppe Paglia, Giuseppe Astarita in Plant Metabolic Engineering
    Protocol 2022
  16. Comprehensive Analysis of Plant Lipids Using Sub-2-μm Particle CO2-Based Chromatography Coupled to Mass Spectrometry

    Lipids play an essential role in plants, and historically manipulating their levels and composition has been an important target for metabolic...
    Carolina Salazar, Michael D. Jones, ... Vladimir Shulaev in Plant Metabolic Engineering
    Protocol 2022
  17. The Synergistic Activity and Interaction Mechanism of Linoleic Acid and a Bioactive Pentapeptide (Tyr-Val-Pro-His-Trp) from Walnut Meal in the Treatment of Alzheimer’s Disease

    The walnut meal is a by-product of walnut oil pressing, which contains a large amount of protein and active compounds. The Walnut protein was...

    Zi-Chun Wang, Yu-** Ling, ... Di-Feng Ren in International Journal of Peptide Research and Therapeutics
    Article 10 May 2023
  18. Liquid Chromatography Methods for Separation of Polar and Charged Intracellular Metabolites for 13C Metabolic Flux Analysis

    Accurate quantification of mass isotopolog distribution (MID) of intracellular metabolites is a key requirement for 13C metabolic flux analysis...
    Damini Jaiswal, Anjali Mittal, ... Pramod P. Wangikar in Metabolic Flux Analysis in Eukaryotic Cells
    Protocol 2020
  19. Metabolomics: Going Deeper, Going Broader, Going Further

    Metabolomics is a continuously dynamic field of research that is driven by demanding research questions and technological advances alike. In this...
    Protocol 2023
  20. The CNK–HYP scaffolding complex promotes RAF activation by enhancing KSR–MEK interaction

    The RAS–MAPK pathway regulates cell proliferation, differentiation and survival, and its dysregulation is associated with cancer development. The...

    Pierre Maisonneuve, Malha Sahmi, ... Marc Therrien in Nature Structural & Molecular Biology
    Article Open access 22 February 2024
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