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  1. Article

    Open Access

    Co-infection with SARS-CoV-2 Omicron and Delta variants revealed by genomic surveillance

    Co-infections with different variants of SARS-CoV-2 are a key precursor to recombination events that are likely to drive SARS-CoV-2 evolution. Rapid identification of such co-infections is required to determin...

    Rebecca J. Rockett, Jenny Draper, Mailie Gall, Eby M. Sim in Nature Communications (2022)

  2. Article

    Open Access

    Documenting elimination of co-circulating COVID-19 clusters using genomics in New South Wales, Australia

    To adapt ‘fishplots’ to describe real-time evolution of SARS-CoV-2 genomic clusters.

    Alicia Arnott, Jenny Draper, Rebecca J. Rockett, Connie Lam in BMC Research Notes (2021)

  3. No Access

    Article

    Scedosporium and Lomentospora infections in lung transplant recipients

    Infections caused by uncommon or rare mould pathogens often complicate the management of lung transplant (Tx) recipients contributing to high mortality. This review explores the epidemiology, diagnosis, and ma...

    Blandine Rammaert, Zoe C. F. Neoh, Sharon C-A. Chen in Current Fungal Infection Reports (2021)

  4. No Access

    Reference Work Entry In depth

    Management of Mucorales Infections in Transplant Patients

    Infections due to Mucorales fungi in hematopoietic stem cell transplantation (HSCT) and solid organ transplant (SOT) recipients may be increasing. Disease is severe and rapidly progressive and carries high mor...

    Sharon C.-A. Chen, Monica A. Slavin in Emerging Transplant Infections (2021)

  5. No Access

    Chapter

    Yeast Infections

    Invasive fungal disease (IFD) caused by yeast pathogens complicates both cancer chemotherapy for haematological malignancy as well autologous and allogeneic haematopoietic stem cell transplantation (HSCT). Inv...

    Alexandre Alanio, Sharon C. -A. Chen in Infection Management in Hematology (2021)

  6. Article

    Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling

    In January 2020, a novel betacoronavirus (family Coronaviridae), named severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), was identified as the etiological agent of a cluster of pneumonia cases occurri...

    Rebecca J. Rockett, Alicia Arnott, Connie Lam, Rosemarie Sadsad in Nature Medicine (2020)

  7. No Access

    Living Reference Work Entry In depth

    Management of Mucorales Infections in Transplant Patients

    Infections due to Mucorales fungi in hematopoietic stem cell transplantation (HSCT) and solid organ transplant (SOT) recipients may be increasing. Disease is severe and rapidly progressive and carries high mor...

    Sharon C.-A. Chen, Monica A. Slavin in Emerging Transplant Infections

  8. No Access

    Article

    Fungal Eye Infections: New Hosts, Novel Emerging Pathogens but No New Treatments?

    We sought to explore the current incidence and associated risk factors associated with fungal eye infections. We also reviewed new diagnostic strategies and recent clinical studies exploring the use of topical...

    Christina C. Chang, Sharon C-A Chen in Current Fungal Infection Reports (2018)

  9. No Access

    Article

    Challenges in Laboratory Detection of Fungal Pathogens in the Airways of Cystic Fibrosis Patients

    Study of the clinical significance of fungal colonization/infection in the airways of cystic fibrosis (CF) patients, especially by filamentous fungi, is challenged by the absence of standardized methodology fo...

    Sharon C.-A. Chen, Wieland Meyer, Catherine H. Pashley in Mycopathologia (2018)

  10. No Access

    Article

    Pseudomonas aeruginosa Inhibits the Growth of Scedosporium and Lomentospora In Vitro

    In vitro bacterial–fungal interaction studies in cystic fibrosis (CF) have mainly focused on interactions between bacteria and Candida. Here we investigated the effect of Pseudomonas aeruginosa on the growth of

    Sharon C.-A. Chen, Shilpa Patel, Wieland Meyer, Belinda Chapman, Hong Yu in Mycopathologia (2018)

  11. No Access

    Article

    Antifungal Susceptibility Testing of Candida and Cryptococcus Species and Mechanisms of Resistance: Implications for Clinical Laboratories

    Resistance to antifungal drugs amongst Candida species is a growing concern, and azole resistance may be emerging in Cryptococcus species. This review provides a contemporary perspective, relevant to the clinical...

    Catriona L. Halliday, Monica A. Slavin in Current Fungal Infection Reports (2017)

  12. Article

    Open Access

    Transcriptome and network analyses in Saccharomyces cerevisiae reveal that amphotericin B and lactoferrin synergy disrupt metal homeostasis and stress response

    Invasive fungal infections are difficult to treat. The few available antifungal drugs have problems with toxicity or efficacy, and resistance is increasing. To overcome these challenges, existing therapies may...

    Chi Nam Ignatius Pang, Yu-Wen Lai, Leona T. Campbell in Scientific Reports (2017)

  13. No Access

    Article

    Epidemiology of Scedosporiosis

    Infections due to Scedosporium/Pseudallescheria species are increasingly recognized in both immunocompromised and immunocompetent hosts. Patients with organ and stem cell transplants and malignancy are at high ri...

    Shradha Subedi, Sharon C.-A. Chen in Current Fungal Infection Reports (2015)

  14. Article

    The Genus Scedosporium and Pseudallescheria: Current Challenges in Laboratory Diagnosis

    Scedosporium and Pseudallescheria fungi are increasingly encountered fungal pathogens. Species identification is important as there are differences in epidemiology, virulence, and antifun...

    Marc Ramsperger, Shuyao Duan, Tania C. Sorrell in Current Clinical Microbiology Reports (2014)

  15. No Access

    Article

    Generalized Subcutaneous Phaeohyphomycosis Caused by Phialophora verrucosa: Report of a Case and Review of Literature

    We report a case of subcutaneous phaeohyphomycosis due to Phialophora verrucosa in a 64-year-old Chinese farmer suffering from CD4+ lymphopenia. He presented with diffuse and infiltrated plaques involving the ent...

    Zhongsheng Tong, Sharon C.-A. Chen, Liuqing Chen, Bilin Dong, Ruoyu Li in Mycopathologia (2013)

  16. No Access

    Article

    Pharmacological and Host Considerations Surrounding Dose Selection and Duration of Therapy with Echinocandins

    Caspofungin, micafungin and anidulafungin are antifungal drugs with excellent safety profiles. Dosing regimens and treatment durations must be appropriate for optimal patient outcomes. Overall, factors that af...

    Chin Fen Neoh, David C. M. Kong, Monica A. Slavin in Current Fungal Infection Reports (2012)

  17. No Access

    Article

    Nocardia Infections of the Face and Neck

    Involvement of the soft tissues of the face and neck by Nocardia spp. is uncommon. We review the epidemiology, clinical features, diagnosis, and management of such infections in the setting of primary cutaneous n...

    Alexander C. Outhred, Matthew R. Watts in Current Infectious Disease Reports (2011)

  18. No Access

    Chapter

    Fungal-Derived Immune Modulating Molecules

    Invasive fungal infections are an increasing clinical problem for which new therapeutic approaches are needed. Understanding the initial interaction between fungi and the host offers potential for ...

    Professor Tania C. Sorrell in Pathogen-Derived Immunomodulatory Molecules (2009)