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  1. Article

    Open Access

    Elevated nuclear TDP-43 induces constitutive exon skip**

    Cytoplasmic inclusions and loss of nuclear TDP-43 are key pathological features found in several neurodegenerative disorders, suggesting both gain- and loss-of-function mechanisms of disease. To study gain-of-...

    Rogger P. Carmen-Orozco, William Tsao, Yingzhi Ye in Molecular Neurodegeneration (2024)

  2. Article

    Open Access

    Amyloid-beta and tau pathologies act synergistically to induce novel disease stage-specific microglia subtypes

    Amongst risk alleles associated with late-onset Alzheimer’s disease (AD), those that converged on the regulation of microglia activity have emerged as central to disease progression. Yet, how canonical amyloid...

    Dong Won Kim, Kevin J. Tu, Alice Wei, Ashley J. Lau in Molecular Neurodegeneration (2022)

  3. No Access

    Book

  4. No Access

    Chapter

    Winding the Clock: Development of Hypothalamic Structures Controlling Biological Timing and Sleep

    The daily cycle of sleep and wake governs all aspects of behavior and is under tight homeostatic regulation. The core circadian oscillator in turn restricts sleep to specific intervals of the solar day. The ne...

    Dong Won Thomas Kim, Seth Blackshaw in Developmental Neuroendocrinology (2020)

  5. Article

    Open Access

    Reactive microglia and IL1β/IL-1R1-signaling mediate neuroprotection in excitotoxin-damaged mouse retina

    Microglia and inflammation have context-specific impacts upon neuronal survival in different models of central nervous system (CNS) disease. Herein, we investigate how inflammatory mediators, including microgl...

    Levi Todd, Isabella Palazzo, Lilianna Suarez, **aoyu Liu in Journal of Neuroinflammation (2019)

  6. No Access

    Protocol

    Antibody Specificity Profiling Using Protein Microarrays

    Antibodies are the most widely used reagent for isolation and detection of specific proteins. However, using antibodies that are not highly specific in these studies can generate inaccurate and misleading data...

    Pedro Ramos-López, José Irizarry, Ignacio Pino, Seth Blackshaw in Epitope Map** Protocols (2018)

  7. No Access

    Protocol

    In Vivo Electroporation of Develo** Mouse Retina

    In vivo electroporation enables the transformation of retinal tissue with engineered DNA plasmids, facilitating the selective expression of desired gene products. This method achieves plasmid transfer via the ...

    Jimmy de Melo, Seth Blackshaw in Retinal Gene Therapy (2018)

  8. Chapter

    Regulation of Body Weight and Metabolism by Tanycyte-Derived Neurogenesis in Young Adult Mice

    The hypothalamus controls many homeostatic and instinctive physiological processes, including the sleep-wake cycle, food intake, and sexually dimorphic behaviors. These behaviors are regulated by environmental...

    Seth Blackshaw, Daniel A. Lee, Thomas Pak, Sooyeon Yoo in Stem Cells in Neuroendocrinology (2016)

  9. No Access

    Protocol

    Large-Scale ISH on Mouse Brain Sections for Systematic Gene Expression Analysis in Develo** Mouse Diencephalon

    The mammalian diencephalon gives rise to the thalamus and hypothalamus. The thalamus contains multiple sensory nuclei and relays sensory information to corresponding cortical areas, while the hypothalamus is a...

    Tomomi Shimogori, Seth Blackshaw in In Situ Hybridization Methods (2015)

  10. Article

    Open Access

    Estrogen-related receptor β deficiency alters body composition and response to restraint stress

    Estrogen-related receptors (ERRs) are orphan nuclear hormone receptors expressed in metabolically active tissues and modulate numerous homeostatic processes. ERRs do not bind the ligand estrogen, but they are ...

    Mardi S Byerly, Roy D Swanson, G William Wong, Seth Blackshaw in BMC Physiology (2013)

  11. Article

    Open Access

    Erratum to: Heme Oxygenase-2 Is Neuroprotective in Cerebral Ischemia

    Sylvain Doré, Kenji Sampei, Shozo Goto, Nabil J Alkayed, Daniel Guastella, Seth Blackshaw, Michela Gallagher, Richard J Traystman, Patricia D Hurn, Raymond C Koehler, and Solomon H Snyder. (1999) Heme Oxygenas...

    Sylvain Doré, Kenji Sampei, Shozo Goto, Nabil J. Alkayed in Molecular Medicine (2013)

  12. No Access

    Protocol

    High-Throughput RNA In Situ Hybridization in Mouse Retina

    The introduction of large-scale gene expression profiling studies has greatly increased the need to rapidly obtain high-quality cellular expression patterns of genes found to exhibit differential expression. T...

    Seth Blackshaw in Retinal Degeneration (2013)

  13. No Access

    Article

    Tanycytes of the hypothalamic median eminence form a diet-responsive neurogenic niche

    The authors describe a neurogenic niche in the postnatal hypothalamus of mice wherein β2-tanycytes generate neurons in response to high-fat diet. Blocking this neurogenesis leads to attenuated weight gain and ...

    Daniel A Lee, Joseph L Bedont, Thomas Pak, Hong Wang, Juan Song in Nature Neuroscience (2012)

  14. Article

    Open Access

    The long noncoding RNA Six3OS acts in trans to regulate retinal development by modulating Six3 activity

    Thousands of different long non-coding RNAs are expressed during embryonic development, but the function of these molecules remains largely unexplored.

    Nicole A Rapicavoli, Erin M Poth, Heng Zhu, Seth Blackshaw in Neural Development (2011)

  15. No Access

    Article

    Pias3-dependent SUMOylation controls mammalian cone photoreceptor differentiation

    The mouse retina includes cone photoreceptors optimized for short (S) and medium (M) wavelengths; the difference lies in the expression of S and M opsin. Onishi and colleagues find that, in M cones, thyroid ho...

    Akishi Onishi, Guang-Hua Peng, Shiming Chen, Seth Blackshaw in Nature Neuroscience (2010)

  16. No Access

    Article

    A genomic atlas of mouse hypothalamic development

    This Resource chronicles dynamic gene expression patterns in the develo** hypothalamus from embryonic day 10.5 through maturity. The authors find that Shh must be expressed in the hypothalamic basal plate fo...

    Tomomi Shimogori, Daniel A Lee, Ana Miranda-Angulo, Yanqin Yang in Nature Neuroscience (2010)

  17. No Access

    Article

    Stem cells that know their place

    Human neural stem cells could be used to treat many diseases, but a major problem with this approach is that these cells give rise to few neurons in the brain. Now a new priming method increases production of ...

    Seth Blackshaw, Constance L. Cepko in Nature Neuroscience (2002)

  18. No Access

    Article

    Mutations in a new photoreceptor-pineal gene on 17p cause Leber congenital amaurosis

    Leber congenital amaurosis (LCA, MIM 204000) accounts for at least 5% of all inherited retinal disease1 and is the most severe inherited retinopathy with the earliest age of onset2. Individuals affected with LCA ...

    Melanie M. Sohocki, Sara J. Bowne, Lori S. Sullivan, Seth Blackshaw in Nature Genetics (2000)

  19. No Access

    Article

    Heme Oxygenase-2 Is Neuroprotective in Cerebral Ischemia

    Heme oxygenase (HO) is believed to be a potent antioxidant enzyme in the nervous system; it degrades heme from heme-containing proteins, giving rise to carbon monoxide, iron, and biliverdin, which is rapidly r...

    Sylvain Doré, Kenji Sampei, Shozo Goto, Nabil J. Alkayed in Molecular Medicine (1999)