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    Article

    Molecular strip** underpins derepression of a toxin–antitoxin system

    Transcription factors control gene expression; among these, transcriptional repressors must liberate the promoter for derepression to occur. Toxin–antitoxin (TA) modules are bacterial elements that autoregulat...

    Grzegorz J. Grabe, Rachel T. Giorgio in Nature Structural & Molecular Biology (2024)

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    Deciphering the mechanical code of the genome and epigenome

    Diverse DNA-deforming processes are impacted by the local mechanical and structural properties of DNA, which in turn depend on local sequence and epigenetic modifications. Deciphering this mechanical code (tha...

    Aakash Basu, Dmitriy G. Bobrovnikov, Basilio Cieza in Nature Structural & Molecular Biology (2022)

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    MiOS, an integrated imaging and computational strategy to model gene folding with nucleosome resolution

    The linear sequence of DNA provides invaluable information about genes and their regulatory elements along chromosomes. However, to fully understand gene function and regulation, we need to dissect how genes p...

    Maria Victoria Neguembor, Juan Pablo Arcon in Nature Structural & Molecular Biology (2022)

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    Article

    Visualizing phosphodiester-bond hydrolysis by an endonuclease

    Different catalytic steps of endonuclease I-DmoI are captured crystallographically to allow direct observation of the generation of a DNA double-strand break. A third metal ion enters the active site and has a...

    Rafael Molina, Stefano Stella, Pilar Redondo in Nature Structural & Molecular Biology (2015)