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  1. Article

    Open Access

    Integrative genome-scale analyses reveal post-transcriptional signatures of early human small intestinal development in a directed differentiation organoid model

    MicroRNAs (miRNAs) are important post-transcriptional gene regulators controlling cellular lineage specification and differentiation during embryonic development, including the gastrointestinal system. However...

    Yu-Han Hung, Meghan Capeling, Jonathan W. Villanueva, Matt Kanke in BMC Genomics (2023)

  2. Article

    Open Access

    miRNA-214-3p stimulates carcinogen-induced mammary epithelial cell apoptosis in mammary cancer-resistant species

    Mammary cancer incidence varies greatly across species and underlying mechanisms remain elusive. We previously showed that mammosphere-derived epithelial cells from species with low mammary cancer incidence, s...

    Rebecca M. Harman, Sanjna P. Das, Matt Kanke, Praveen Sethupathy in Communications Biology (2023)

  3. No Access

    Article

    Comparative Analysis of microRNAs that Stratify in vitro Mammary stem and Progenitor Activity Reveals Functionality of Human miR-92b-3p

    Mammary stem/progenitor cells are fundamental for mammary gland development and function. However, much remains to be elucidated regarding their function in mammals beyond the traditionally studied rodents, hu...

    James L. Miller, Matt Kanke, Gat Rauner in Journal of Mammary Gland Biology and Neopl… (2022)

  4. Article

    Open Access

    Comprehensive microRNA analysis across genome-edited colorectal cancer organoid models reveals miR-24 as a candidate regulator of cell survival

    Somatic mutations drive colorectal cancer (CRC) by disrupting gene regulatory mechanisms. Distinct combinations of mutations can result in unique changes to regulatory mechanisms leading to variability in the ...

    Jonathan W. Villanueva, Lawrence Kwong, Teng Han, Salvador Alonso Martinez in BMC Genomics (2022)

  5. Article

    Open Access

    Candidate master microRNA regulator of arsenic-induced pancreatic beta cell impairment revealed by multi-omics analysis

    Arsenic is a pervasive environmental toxin that is listed as the top priority for investigation by the Agency for Toxic Substance and Disease Registry. While chronic exposure to arsenic is associated with type...

    Jenna E. Todero, Kieran Koch-Laskowski, Qing Shi, Matt Kanke in Archives of Toxicology (2022)

  6. Article

    Open Access

    Exploratory study reveals far reaching systemic and cellular effects of verapamil treatment in subjects with type 1 diabetes

    Currently, no oral medications are available for type 1 diabetes (T1D). While our recent randomized placebo-controlled T1D trial revealed that oral verapamil had short-term beneficial effects, their duration a...

    Guanlan Xu, Tiffany D. Grimes, Truman B. Grayson, Junqin Chen in Nature Communications (2022)

  7. No Access

    Article

    Arsenic is more potent than cadmium or manganese in disrupting the INS-1 beta cell microRNA landscape

    Diabetes is a metabolic disorder characterized by fasting hyperglycemia and impaired glucose tolerance. Laboratory and population studies have shown that inorganic arsenic (iAs) can impair these pathways. Othe...

    Rowan Beck, Mohit Chandi, Matt Kanke, Miroslav Stýblo in Archives of Toxicology (2019)