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  1. Article

    Open Access

    Targeted gene expression profiling for accurate endometrial receptivity testing

    Expressional profiling of the endometrium enables the personalised timing of the window of implantation (WOI). This study presents and evaluates a novel analytical pipeline based on a TAC-seq (Targeted Allele ...

    Alvin Meltsov, Merli Saare, Hindrek Teder, Priit Paluoja in Scientific Reports (2023)

  2. Article

    Open Access

    Genome-wide association study identifies five risk loci for pernicious anemia

    Pernicious anemia is a rare condition characterized by vitamin B12 deficiency anemia due to lack of intrinsic factor, often caused by autoimmune gastritis. Patients with pernicious anemia have a higher inciden...

    Triin Laisk, Maarja Lepamets, Mariann Koel, Erik Abner in Nature Communications (2021)

  3. No Access

    Article

    In vitro fertilization does not increase the incidence of de novo copy number alterations in fetal and placental lineages

    Although chromosomal instability (CIN) is a common phenomenon in cleavage-stage embryogenesis following in vitro fertilization (IVF)13, its rate in naturally conceived human embryos is unknown. CIN leads to mosa...

    Masoud Zamani Esteki, Triin Viltrop, Olga Tšuiko, Airi Tiirats in Nature Medicine (2019)

  4. Article

    Open Access

    TAC-seq: targeted DNA and RNA sequencing for precise biomarker molecule counting

    Targeted next-generation sequencing (NGS) methods have become essential in medical research and diagnostics. In addition to NGS sensitivity and high-throughput capacity, precise biomolecule counting based on u...

    Hindrek Teder, Mariann Koel, Priit Paluoja, Tatjana Jatsenko in npj Genomic Medicine (2018)

  5. Article

    Open Access

    Meta-signature of human endometrial receptivity: a meta-analysis and validation study of transcriptomic biomarkers

    Previous transcriptome studies of the human endometrium have revealed hundreds of simultaneously up- and down-regulated genes that are involved in endometrial receptivity. However, the overlap between the stud...

    Signe Altmäe, Mariann Koel, Urmo Võsa, Priit Adler in Scientific Reports (2017)

  6. Article

    Open Access

    Globin mRNA reduction for whole-blood transcriptome sequencing

    The transcriptome analysis of whole-blood RNA by sequencing holds promise for the identification and tracking of biomarkers; however, the high globin mRNA (gmRNA) content of erythrocytes hampers whole-blood an...

    Kaarel Krjutškov, Mariann Koel, Anne Mari Roost, Shintaro Katayama in Scientific Reports (2016)