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    Article

    Quantitative trait loci for rolled leaf in a wheat EMS mutant from Jagger

    Two QTLs with major effects on rolled leaf trait were consistently detected on chromosomes 1A (QRl.hwwg-1AS) and 5A (QRl.hwwg-5AL) in the field experiments.

    Ruolin Bian, Na Liu, Yuzhou Xu, Zhenqi Su in Theoretical and Applied Genetics (2023)

  2. Article

    Open Access

    Population genomics of Puccinia graminis f.sp. tritici highlights the role of admixture in the origin of virulent wheat rust races

    Puccinia graminis f.sp. tritici (Pgt) causes stem rust disease in wheat that can result in severe yield losses. The factors driving the evolution of its virulence and adaptation remain poorly characterized. We ut...

    Yuanwen Guo, Bliss Betzen, Andres Salcedo, Fei He in Nature Communications (2022)

  3. Article

    Open Access

    Genomic variants affecting homoeologous gene expression dosage contribute to agronomic trait variation in allopolyploid wheat

    Allopolyploidy greatly expands the range of possible regulatory interactions among functionally redundant homoeologous genes. However, connection between the emerging regulatory complexity and expression and p...

    Fei He, Wei Wang, William B. Rutter, Katherine W. Jordan, Jie Ren in Nature Communications (2022)

  4. Article

    Open Access

    Differential chromatin accessibility landscape reveals structural and functional features of the allopolyploid wheat chromosomes

    Our understanding of how the complexity of the wheat genome influences the distribution of chromatin states along the homoeologous chromosomes is limited. Using a differential nuclease sensitivity assay, we in...

    Katherine W. Jordan, Fei He, Monica Fernandez de Soto, Alina Akhunova in Genome Biology (2020)

  5. No Access

    Article

    Analysis of recombinant inbred line populations derived from wheat landraces to identify new genes for wheat stem sawfly resistance

    Wheat landrace accessions were chosen from areas of the world with historical European wheat stem sawfly (Cephus pygmaeus L.) selection pressure to develop six recombinant inbred line (RIL) populations. Molecular...

    Andrea C. Varella, David K. Weaver, Nancy K. Blake in Theoretical and Applied Genetics (2019)

  6. Article

    Open Access

    A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes

    Bread wheat is an allopolyploid species with a large, highly repetitive genome. To investigate the impact of selection on variants distributed among homoeologous wheat genomes and to build a foundation for und...

    Katherine W Jordan, Shichen Wang, Yanni Lun, Laura-Jayne Gardiner in Genome Biology (2015)

  7. Article

    Open Access

    The Drosophila melanogaster Genetic Reference Panel

    A major challenge of biology is understanding the relationship between molecular genetic variation and variation in quantitative traits, including fitness. This relationship determines our ability to predict p...

    Trudy F. C. Mackay, Stephen Richards, Eric A. Stone, Antonio Barbadilla in Nature (2012)

  8. Article

    Open Access

    Systems genetics analysis of body weight and energy metabolism traits in Drosophila melanogaster

    Obesity and phenotypic traits associated with this condition exhibit significant heritability in natural populations of most organisms. While a number of genes and genetic pathways have been implicated to play...

    Patricia Jumbo-Lucioni, Julien F Ayroles, Michelle Moses Chambers in BMC Genomics (2010)

  9. No Access

    Article

    Systems genetics of complex traits in Drosophila melanogaster

    Trudy Mackay and colleagues present a resource of 40 Drosophila melanogaster wild-derived inbred lines. The authors quantify genome-wide variation in transcript abundance for six ecologically relevant traits, cha...

    Julien F Ayroles, Mary Anna Carbone, Eric A Stone, Katherine W Jordan in Nature Genetics (2009)

  10. Article

    Open Access

    Quantitative genomics of locomotor behavior in Drosophila melanogaster

    Locomotion is an integral component of most animal behaviors, and many human health problems are associated with locomotor deficits. Locomotor behavior is a complex trait, with population variation attributabl...

    Katherine W Jordan, Mary Anna Carbone, Akihiko Yamamoto in Genome Biology (2007)