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Open AccessIntegrated transcriptome and microRNA analysis reveals molecular responses to high-temperature stress in the liver of American shad (Alosa sapidissima)
Fish reproduction, development and growth are directly affected by temperature, investigating the regulatory mechanisms behind high temperature stress is helpful to construct a finer molecular network. In this...
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Article
Molecular characterization and function of hif1a and fih1 in response to acute thermal stress in American shad (Alosa sapidissima)
In order to evaluate the function of hypoxia-inducible factor-1 alpha (hif1α) and factor inhibiting hif1α (fih1) in response to thermal stress, we first conducted a functional analysis of A. sapidissima hif1α and...
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Article
Open AccessSingle nucleotide polymorphism SNP19140160 A > C is a potential breeding locus for fast-growth largemouth bass (Micropterus salmoides)
Largemouth bass (Micropterus salmoides) has significant economic value as a high-yielding fish species in China’s freshwater aquaculture industry. Determining the major genes related to growth traits and identify...
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Article
Open AccessmicroRNA regulation of skin pigmentation in golden-back mutant of crucian carp from a rice-fish integrated farming system
MicroRNAs (miRNAs) are endogenous small non-coding RNAs (21–25 nucleotides) that act as essential components of several biological processes. Golden-back crucian carp (GBCrC, Carassius auratus) is a naturally mut...
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Correction to: Transcriptome analysis of skin color variation during and after overwintering of Malaysian red tilapia
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Identification and characterization of 76 SNP markers in the large-scale loach (Paramisgurnus dabryanus) by using SLAF sequencing
The large-scale loach, Paramisgurnus dabryanus, is a commercially important fish species in East Asia. However, little is known about the genetics of this species. In this study, a total of 715,539 putative singl...
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Article
Transcriptome analysis of skin color variation during and after overwintering of Malaysian red tilapia
The commercial value of red tilapia is hampered by variations in skin color during overwintering. In this study, three types of skin of red tilapia, including the skin remained pink color during and after over...
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Article
Non-institutional Factors in Sha** Rural Elections and Governance in China: a Pragmatist Perspective
What type of micro individual factors may affect rural elections and governance in China? What may affect the dynamics of power politics in rural China? Based on intensive field interviews with rural residents...
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Article
Development of SNP markers for the bighead carp (Hypophthalmichthys nobilis) by using transcriptomic sequences
The bighead carp (Hypophthalmichthys nobilis) is a native freshwater fish species in China. However, the wild fishery resources of H. nobilis have recently suffered a drastic decline. In this study, a total of 10...
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Article
Open AccessDynamic transcriptome sequencing and analysis during early development in the bighead carp (Hypophthalmichthys nobilis)
Early development is a key process of the life history of fish. However, the relationship between the transcriptome and the dynamic regulation of early development is still uncharacterized in the bighead carp (Hy...
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Article
Open AccessIntegrated analysis of long non-coding RNA and mRNA expression in different colored skin of koi carp
Long non-coding RNAs (lncRNAs) perform crucial roles in biological process involving complex mechanisms. However, information regarding their abundance, characteristics and potential functions linked to fish s...
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Article
Open AccessPopulation structure, demographic history and local adaptation of the grass carp
Genetic diversity within a species reflects population evolution, ecology, and ability to adapt. Genome-wide population surveys of both natural and introduced populations provide insights into genetic diversit...
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Article
Microsatellite records for volume 11, issue 1
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Open AccessIdentification and characterization of skin color microRNAs in Koi carp (Cyprinus carpio L.) by Illumina sequencing
MicroRNAs (miRNAs) are endogenous, small (21–25 nucleotide), non-coding RNAs that play important roles in numerous biological processes. Koi carp exhibit diverse color patterns, making it an ideal subject for ...
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Article
Open AccessErratum: Comparative Transcriptome Analysis Identifies Candidate Genes Related to Skin Color Differentiation in Red Tilapia
Scientific Reports 6: Article number: 31347; published online: 11 August 2016; updated: 11 May 2018 In the original version of this Article, the Supplementary Information files containing the supplementary fig...
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Article
ZDHHC7-mediated S-palmitoylation of Scribble regulates cell polarity
The use of activity-based chemical probes revealed that Scribble is palmitoylated at cysteine residues by the palmitoyl acyltransferase ZDHHC7. Loss of Scribble palmitoylation results in loss of cell polarity ...
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Article
Open AccessComparative Transcriptome Analysis Identifies Candidate Genes Related to Skin Color Differentiation in Red Tilapia
Red tilapia is becoming more popular for aquaculture production in China in recent years. However, the pigmentation differentiation in genetic breeding is the main problem limiting its development of commercia...
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Article
Genetic parameter estimates and genotype by environment interaction analyses for early growth traits in grass carp (Ctenopharyngodon idella)
Despite the importance of grass carp (Ctenopharyngodon idella) in aquaculture worldwide, selective breeding programs for growth traits remain limited. This study aimed to assess the genetic effects and extent of ...
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Article
Identification, characterization and feeding response of peptide YYb (PYYb) gene in grass carp (Ctenopharyngodon idellus)
The peptide YYb (PYYb) is a fish-specific peptide belonging to the neuropeptide Y (NPY) family. In the present study, the full-length cDNA sequence and genomic structure of PYYb (gcPYYb) from Ctenopharyngodon ide...
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Article
Multiplex microsatellite PCR sets for parentage assignment of grass carp (Ctenopharyngodon idella)
Pedigree information is essential for the genetic improvement of traits of interests in breeding programs. In this study, twelve microsatellite loci were selected to optimize three multiplex PCR protocols for ...
